Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kockovaella_20imperatae_20[genbank_20GCA_5F002102565.1_202017-04-20]
38 sequences; 17,465,713 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq27 365 7e-99
seq26 365 7e-99
>seq27
Length=18150
Score = 365 bits (404), Expect = 7e-99
Identities = 235/257 (91%), Gaps = 0/257 (0%)
Strand=Plus/Minus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61
||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 6323 ACTCGCTGGCTCAGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 6264
Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121
|||||||||||||||||||||| | |||| | ||| | ||||||||||||||| | |
Sbjct 6263 CCTGTTATTGCCTCAAACTTCCGTCGGCTAAACGCCGACAGTCCCTCTAAGAAGTCGACG 6204
Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181
|||| || || || | ||||||||||||||||||||||||||||||||||||||||
Sbjct 6203 ACCAGCCGGAGCCGGCCTGACTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 6144
Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 6143 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 6084
Query 242 AGAGCTATCAATCTGTC 258
|||||||||||||||||
Sbjct 6083 AGAGCTATCAATCTGTC 6067
Score = 365 bits (404), Expect = 7e-99
Identities = 235/257 (91%), Gaps = 0/257 (0%)
Strand=Plus/Minus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61
||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 14037 ACTCGCTGGCTCAGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 13978
Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121
|||||||||||||||||||||| | |||| | ||| | ||||||||||||||| | |
Sbjct 13977 CCTGTTATTGCCTCAAACTTCCGTCGGCTAAACGCCGACAGTCCCTCTAAGAAGTCGACG 13918
Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181
|||| || || || | ||||||||||||||||||||||||||||||||||||||||
Sbjct 13917 ACCAGCCGGAGCCGGCCTGACTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 13858
Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 13857 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 13798
Query 242 AGAGCTATCAATCTGTC 258
|||||||||||||||||
Sbjct 13797 AGAGCTATCAATCTGTC 13781
>seq26
Length=18679
Score = 365 bits (404), Expect = 7e-99
Identities = 235/257 (91%), Gaps = 0/257 (0%)
Strand=Plus/Plus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61
||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 931 ACTCGCTGGCTCAGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 990
Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121
|||||||||||||||||||||| | |||| | ||| | ||||||||||||||| | |
Sbjct 991 CCTGTTATTGCCTCAAACTTCCGTCGGCTAAACGCCGACAGTCCCTCTAAGAAGTCGACG 1050
Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181
|||| || || || | ||||||||||||||||||||||||||||||||||||||||
Sbjct 1051 ACCAGCCGGAGCCGGCCTGACTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 1110
Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 1170
Query 242 AGAGCTATCAATCTGTC 258
|||||||||||||||||
Sbjct 1171 AGAGCTATCAATCTGTC 1187
Score = 365 bits (404), Expect = 7e-99
Identities = 235/257 (91%), Gaps = 0/257 (0%)
Strand=Plus/Plus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61
||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 8644 ACTCGCTGGCTCAGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 8703
Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121
|||||||||||||||||||||| | |||| | ||| | ||||||||||||||| | |
Sbjct 8704 CCTGTTATTGCCTCAAACTTCCGTCGGCTAAACGCCGACAGTCCCTCTAAGAAGTCGACG 8763
Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181
|||| || || || | ||||||||||||||||||||||||||||||||||||||||
Sbjct 8764 ACCAGCCGGAGCCGGCCTGACTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 8823
Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 8824 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 8883
Query 242 AGAGCTATCAATCTGTC 258
|||||||||||||||||
Sbjct 8884 AGAGCTATCAATCTGTC 8900
Score = 365 bits (404), Expect = 7e-99
Identities = 235/257 (91%), Gaps = 0/257 (0%)
Strand=Plus/Plus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61
||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 16358 ACTCGCTGGCTCAGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 16417
Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121
|||||||||||||||||||||| | |||| | ||| | ||||||||||||||| | |
Sbjct 16418 CCTGTTATTGCCTCAAACTTCCGTCGGCTAAACGCCGACAGTCCCTCTAAGAAGTCGACG 16477
Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181
|||| || || || | ||||||||||||||||||||||||||||||||||||||||
Sbjct 16478 ACCAGCCGGAGCCGGCCTGACTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 16537
Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 16538 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 16597
Query 242 AGAGCTATCAATCTGTC 258
|||||||||||||||||
Sbjct 16598 AGAGCTATCAATCTGTC 16614
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 796799706678
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |