Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kockovaella_20imperatae_20[genbank_20GCA_5F002102565.1_202017-04-20]
38 sequences; 17,465,713 total letters
Query= AAMG01001382.1
Length=124
Score E
Sequences producing significant alignments: (Bits) Value
seq27 100 2e-19
seq26 100 2e-19
>seq27
Length=18150
Score = 100 bits (110), Expect = 2e-19
Identities = 92/110 (84%), Gaps = 6/110 (5%)
Strand=Plus/Minus
Query 13 CCGTTCGCCGGGTCCACAAAGCCAATTCCGAAAGTTCTCACTAAGCCATTTCATTCGGTA 72
||||| ||||| ||| ||| |||| | | || | |||||||||||||| || ||||||
Sbjct 6541 CCGTT-GCCGGCTCCCCAATGCCAGTCCGGAGAC--CTCACTAAGCCATT-CAATCGGTA 6486
Query 73 GTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAG 122
||| ||||| ||||| |||||||||||||||||||||||| |||||| ||
Sbjct 6485 GTA-GCGACAGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAACGCGAG 6438
Score = 100 bits (110), Expect = 2e-19
Identities = 92/110 (84%), Gaps = 6/110 (5%)
Strand=Plus/Minus
Query 13 CCGTTCGCCGGGTCCACAAAGCCAATTCCGAAAGTTCTCACTAAGCCATTTCATTCGGTA 72
||||| ||||| ||| ||| |||| | | || | |||||||||||||| || ||||||
Sbjct 14255 CCGTT-GCCGGCTCCCCAATGCCAGTCCGGAGAC--CTCACTAAGCCATT-CAATCGGTA 14200
Query 73 GTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAG 122
||| ||||| ||||| |||||||||||||||||||||||| |||||| ||
Sbjct 14199 GTA-GCGACAGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAACGCGAG 14152
>seq26
Length=18679
Score = 100 bits (110), Expect = 2e-19
Identities = 92/110 (84%), Gaps = 6/110 (5%)
Strand=Plus/Plus
Query 13 CCGTTCGCCGGGTCCACAAAGCCAATTCCGAAAGTTCTCACTAAGCCATTTCATTCGGTA 72
||||| ||||| ||| ||| |||| | | || | |||||||||||||| || ||||||
Sbjct 713 CCGTT-GCCGGCTCCCCAATGCCAGTCCGGAGAC--CTCACTAAGCCATT-CAATCGGTA 768
Query 73 GTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAG 122
||| ||||| ||||| |||||||||||||||||||||||| |||||| ||
Sbjct 769 GTA-GCGACAGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAACGCGAG 816
Score = 100 bits (110), Expect = 2e-19
Identities = 92/110 (84%), Gaps = 6/110 (5%)
Strand=Plus/Plus
Query 13 CCGTTCGCCGGGTCCACAAAGCCAATTCCGAAAGTTCTCACTAAGCCATTTCATTCGGTA 72
||||| ||||| ||| ||| |||| | | || | |||||||||||||| || ||||||
Sbjct 8426 CCGTT-GCCGGCTCCCCAATGCCAGTCCGGAGAC--CTCACTAAGCCATT-CAATCGGTA 8481
Query 73 GTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAG 122
||| ||||| ||||| |||||||||||||||||||||||| |||||| ||
Sbjct 8482 GTA-GCGACAGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAACGCGAG 8529
Score = 100 bits (110), Expect = 2e-19
Identities = 92/110 (84%), Gaps = 6/110 (5%)
Strand=Plus/Plus
Query 13 CCGTTCGCCGGGTCCACAAAGCCAATTCCGAAAGTTCTCACTAAGCCATTTCATTCGGTA 72
||||| ||||| ||| ||| |||| | | || | |||||||||||||| || ||||||
Sbjct 16140 CCGTT-GCCGGCTCCCCAATGCCAGTCCGGAGAC--CTCACTAAGCCATT-CAATCGGTA 16195
Query 73 GTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAG 122
||| ||||| ||||| |||||||||||||||||||||||| |||||| ||
Sbjct 16196 GTA-GCGACAGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAACGCGAG 16243
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 300799892840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |