Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F001562095.1_202016-02-16] 31 sequences; 46,106,741 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq18 154 8e-36 seq26 149 3e-34 >seq18 Length=176572 Score = 154 bits (170), Expect = 8e-36 Identities = 107/119 (90%), Gaps = 3/119 (3%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCA--AAATGATAACATCGC 58 ||||||||||||||||||||||||||||||||||||||| || |||| | | |||| Sbjct 30164 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGACGCATCAAATT-TGAGGTCGC 30106 Query 59 CCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||| Sbjct 30105 CCGATCCCTAGTCGGCATAGTTTACTGTTAAGACTACAACGGTATCTGATCGTTTTCGA 30047 Score = 154 bits (170), Expect = 8e-36 Identities = 107/119 (90%), Gaps = 3/119 (3%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCA--AAATGATAACATCGC 58 ||||||||||||||||||||||||||||||||||||||| || |||| | | |||| Sbjct 39894 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGACGCATCAAATT-TGAGGTCGC 39836 Query 59 CCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||| Sbjct 39835 CCGATCCCTAGTCGGCATAGTTTACTGTTAAGACTACAACGGTATCTGATCGTTTTCGA 39777 Score = 154 bits (170), Expect = 8e-36 Identities = 107/119 (90%), Gaps = 3/119 (3%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCA--AAATGATAACATCGC 58 ||||||||||||||||||||||||||||||||||||||| || |||| | | |||| Sbjct 49192 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGACGCATCAAATT-TGAGGTCGC 49134 Query 59 CCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||| Sbjct 49133 CCGATCCCTAGTCGGCATAGTTTACTGTTAAGACTACAACGGTATCTGATCGTTTTCGA 49075 Score = 154 bits (170), Expect = 8e-36 Identities = 107/119 (90%), Gaps = 3/119 (3%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCA--AAATGATAACATCGC 58 ||||||||||||||||||||||||||||||||||||||| || |||| | | |||| Sbjct 58489 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGACGCATCAAATT-TGAGGTCGC 58431 Query 59 CCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||| Sbjct 58430 CCGATCCCTAGTCGGCATAGTTTACTGTTAAGACTACAACGGTATCTGATCGTTTTCGA 58372 Score = 154 bits (170), Expect = 8e-36 Identities = 105/117 (90%), Gaps = 1/117 (1%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| ||||||||||||||||||||||||| || |||| || | || || || Sbjct 67467 GAACCCAAAAACTTTGATTTCTCGTAAGGTGCCGAACGGGTCATCAT-AGAATCCCGTCC 67409 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 67408 GATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 67352 Score = 154 bits (170), Expect = 8e-36 Identities = 105/117 (90%), Gaps = 1/117 (1%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| ||||||||||||||||||||||||| || |||| || | || || || Sbjct 75408 GAACCCAAAAACTTTGATTTCTCGTAAGGTGCCGAACGGGTCATCAT-AGAATCCCGTCC 75350 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 75349 GATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 75293 Score = 145 bits (160), Expect = 4e-33 Identities = 104/117 (89%), Gaps = 2/117 (2%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| ||||||||||||||||||||||||| || |||| || | || || || Sbjct 19374 GAACCCAAAAACTTTGATTTCTCGTAAGGTGCCGAACGGGTCATCAT-AGAATCCCGTCC 19432 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| Sbjct 19433 GATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGT-TCTGATCGTCTTCGA 19488 >seq26 Length=3662990 Score = 149 bits (164), Expect = 3e-34 Identities = 107/120 (89%), Gaps = 4/120 (3%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCA--AAATGATAACATCGC 58 ||||||||||||||||||||||||||||||||||||||| || |||| | | |||| Sbjct 941127 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGACGCATCAAAT-TTGAGGTCGC 941069 Query 59 CCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTAC-GACGGTATCTGATCGTCTTCGA 117 ||||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||| Sbjct 941068 CCGATCCCTAGTCGGCATAGTTTACTGTTAAGACTACAAACGGTATCTGATCGTTTTCGA 941009 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278399919090