Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F001562095.1_202016-02-16] 31 sequences; 46,106,741 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq26 241 2e-61 seq18 241 2e-61 >seq26 Length=3662990 Score = 241 bits (266), Expect = 2e-61 Identities = 174/199 (87%), Gaps = 3/199 (2%) Strand=Plus/Minus Query 1 CGTCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGT 60 || ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| Sbjct 940870 CGACTCTAGAAACCAACAAAATAGAACCGCACGTCCTATTTTATTATTCCATGCTAATGT 940811 Query 61 ATTCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCT 120 |||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 940810 ATTCAGGCATAGGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCC 940751 Query 121 C--CGCACACCAATGAA-GGCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTA 177 | ||||||||||| || |||| | |||||||||||||||| | || || | ||||| Sbjct 940750 CGACGCACACCAATAAAGGGCACGCCGGCTCACCAAGAGGTAAGACTCAGTCAGACAGTA 940691 Query 178 CTCGCCGTGAGGCGGACCA 196 | | ||||||||||||||| Sbjct 940690 CACACCGTGAGGCGGACCA 940672 >seq18 Length=176572 Score = 241 bits (266), Expect = 2e-61 Identities = 174/199 (87%), Gaps = 3/199 (2%) Strand=Plus/Minus Query 1 CGTCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGT 60 || ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| Sbjct 29908 CGACTCTAGAAACCAACAAAATAGAACCGCACGTCCTATTTTATTATTCCATGCTAATGT 29849 Query 61 ATTCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCT 120 |||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 29848 ATTCAGGCATAGGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCC 29789 Query 121 C--CGCACACCAATGAA-GGCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTA 177 | ||||||||||| || |||| | |||||||||||||||| | || || | ||||| Sbjct 29788 CGACGCACACCAATAAAGGGCACGCCGGCTCACCAAGAGGTAAGACTCAGTCAGACAGTA 29729 Query 178 CTCGCCGTGAGGCGGACCA 196 | | ||||||||||||||| Sbjct 29728 CACACCGTGAGGCGGACCA 29710 Score = 241 bits (266), Expect = 2e-61 Identities = 174/199 (87%), Gaps = 3/199 (2%) Strand=Plus/Minus Query 1 CGTCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGT 60 || ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| Sbjct 48936 CGACTCTAGAAACCAACAAAATAGAACCGCACGTCCTATTTTATTATTCCATGCTAATGT 48877 Query 61 ATTCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCT 120 |||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 48876 ATTCAGGCATAGGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCC 48817 Query 121 C--CGCACACCAATGAA-GGCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTA 177 | ||||||||||| || |||| | |||||||||||||||| | || || | ||||| Sbjct 48816 CGACGCACACCAATAAAGGGCACGCCGGCTCACCAAGAGGTAAGACTCAGTCAGACAGTA 48757 Query 178 CTCGCCGTGAGGCGGACCA 196 | | ||||||||||||||| Sbjct 48756 CACACCGTGAGGCGGACCA 48738 Score = 241 bits (266), Expect = 2e-61 Identities = 174/199 (87%), Gaps = 3/199 (2%) Strand=Plus/Minus Query 1 CGTCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGT 60 || ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| Sbjct 58233 CGACTCTAGAAACCAACAAAATAGAACCGCACGTCCTATTTTATTATTCCATGCTAATGT 58174 Query 61 ATTCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCT 120 |||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 58173 ATTCAGGCATAGGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCC 58114 Query 121 C--CGCACACCAATGAA-GGCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTA 177 | ||||||||||| || |||| | |||||||||||||||| | || || | ||||| Sbjct 58113 CGACGCACACCAATAAAGGGCACGCCGGCTCACCAAGAGGTAAGACTCAGTCAGACAGTA 58054 Query 178 CTCGCCGTGAGGCGGACCA 196 | | ||||||||||||||| Sbjct 58053 CACACCGTGAGGCGGACCA 58035 Score = 233 bits (258), Expect = 2e-59 Identities = 174/200 (87%), Gaps = 4/200 (2%) Strand=Plus/Minus Query 1 CGTCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGT 60 || ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| Sbjct 39640 CGACTCTAGAAACCAACAAAATAGAACCGCACGTCCTATTTTATTATTCCATGCTAATGT 39581 Query 61 -ATTCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCC 119 |||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 39580 TATTCAGGCATAGGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCC 39521 Query 120 TC--CGCACACCAATGAA-GGCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGT 176 | ||||||||||| || |||| | |||||||||||||||| | || || | |||| Sbjct 39520 CCGACGCACACCAATAAAGGGCACGCCGGCTCACCAAGAGGTAAGACTCAGTCAGACAGT 39461 Query 177 ACTCGCCGTGAGGCGGACCA 196 || | ||||||||||||||| Sbjct 39460 ACACACCGTGAGGCGGACCA 39441 Score = 178 bits (196), Expect = 2e-42 Identities = 157/192 (82%), Gaps = 3/192 (2%) Strand=Plus/Minus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 67207 CTAGAAACCAACAAAATAGAACCGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 67148 Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125 || | |||||||||||||||||||||||| ||| ||||||||||||||||| || || Sbjct 67147 AGCAAAGGCCTGCTTTGAACACTCTAATTTTTTCACAGTAAAAGTCCTGGTTCC-CCCCA 67089 Query 126 CA-CCAATGAAGGCATACGGGCTCACCAAGAGG-TAGGGCTGGGTAATGCAGTACTCGCC 183 || ||| ||||||| || || ||| ||| ||| | | |||||||||| Sbjct 67088 CAGCCAGTGAAGGCCATGAGGTTCCCCAGAAGGAAAGGCCCAGCCGGACCAGTACTCGCG 67029 Query 184 GTGAGGCGGACC 195 |||||||||||| Sbjct 67028 GTGAGGCGGACC 67017 Score = 178 bits (196), Expect = 2e-42 Identities = 157/192 (82%), Gaps = 3/192 (2%) Strand=Plus/Minus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 75148 CTAGAAACCAACAAAATAGAACCGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 75089 Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125 || | |||||||||||||||||||||||| ||| ||||||||||||||||| || || Sbjct 75088 AGCAAAGGCCTGCTTTGAACACTCTAATTTTTTCACAGTAAAAGTCCTGGTTCC-CCCCA 75030 Query 126 CA-CCAATGAAGGCATACGGGCTCACCAAGAGG-TAGGGCTGGGTAATGCAGTACTCGCC 183 || ||| ||||||| || || ||| ||| ||| | | |||||||||| Sbjct 75029 CAGCCAGTGAAGGCCATGAGGTTCCCCAGAAGGAAAGGCCCAGCCGGACCAGTACTCGCG 74970 Query 184 GTGAGGCGGACC 195 |||||||||||| Sbjct 74969 GTGAGGCGGACC 74958 Score = 176 bits (194), Expect = 5e-42 Identities = 155/191 (81%), Gaps = 2/191 (1%) Strand=Plus/Plus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 19632 CTAGAAACCAACAAAATAGAACCGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 19691 Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125 || | |||||||||||||||||||||||| ||| ||||||||||||||||| || || Sbjct 19692 AGCAAAGGCCTGCTTTGAACACTCTAATTTTTTCACAGTAAAAGTCCTGGTTCCCCCACA 19751 Query 126 CACCAATGAAGGCATACGGGCTCACCAAGAGG-TAGGGCTGGGTAATGCAGTACTCGCCG 184 ||| ||||||| || || ||| ||| ||| | | |||||||||| | Sbjct 19752 -GCCAGTGAAGGCCATGAGGTTCCCCAGAAGGAAAGGCCCAGCCGGACCAGTACTCGCGG 19810 Query 185 TGAGGCGGACC 195 ||||||||||| Sbjct 19811 TGAGGCGGACC 19821 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595199821254