Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F001700625.1_202016-08-08] 335 sequences; 41,818,685 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq151 340 3e-91 >seq151 Length=71382 Score = 340 bits (376), Expect = 3e-91 Identities = 259/302 (86%), Gaps = 3/302 (1%) Strand=Plus/Minus Query 19 CTTTCCTTCTGGGGATCCG-CATGCCCTTCACTGG-GTGTGCCGGGGAGCCAGGACTTTT 76 ||| ||| ||| || ||| | ||||||| | ||| ||| | |||||| ||||||||||| Sbjct 8788 CTTACCTCTTGGTGAGCCGGCGTGCCCTTTATTGGTGTGCGTCGGGGAACCAGGACTTTT 8729 Query 77 ACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCATGGAATA 136 || |||| |||||||||||||||||||||||||| ||| |||||||||||||||||||| Sbjct 8728 ACCTTGAGAAAATTAGAGTGTTCAAAGCAGGCCTATGCCTGAATACATTAGCATGGAATA 8669 Query 137 ATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAG 196 ||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 8668 ATAAAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGAGTCGCCGTAATGATTAATAG 8609 Query 197 GGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGA 256 ||||||| ||||| | ||||| | | | |||||||||||||||||||| | | |||| Sbjct 8608 GGATAGTTGGGGGCATTGGTATTGAGTCGCTAGAGGTGAAATTCTTGGATTGACTCAAGA 8549 Query 257 CTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGG 316 | |||||||||||||| || |||||||||||||||||||||| ||||||| |||||| Sbjct 8548 CCGACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGAAGGTTAGG 8490 Query 317 GG 318 || Sbjct 8489 GG 8488 Score = 340 bits (376), Expect = 3e-91 Identities = 259/302 (86%), Gaps = 3/302 (1%) Strand=Plus/Minus Query 19 CTTTCCTTCTGGGGATCCG-CATGCCCTTCACTGG-GTGTGCCGGGGAGCCAGGACTTTT 76 ||| ||| ||| || ||| | ||||||| | ||| ||| | |||||| ||||||||||| Sbjct 19359 CTTACCTCTTGGTGAGCCGGCGTGCCCTTTATTGGTGTGCGTCGGGGAACCAGGACTTTT 19300 Query 77 ACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCATGGAATA 136 || |||| |||||||||||||||||||||||||| ||| |||||||||||||||||||| Sbjct 19299 ACCTTGAGAAAATTAGAGTGTTCAAAGCAGGCCTATGCCTGAATACATTAGCATGGAATA 19240 Query 137 ATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAG 196 ||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 19239 ATAAAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGAGTCGCCGTAATGATTAATAG 19180 Query 197 GGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGA 256 ||||||| ||||| | ||||| | | | |||||||||||||||||||| | | |||| Sbjct 19179 GGATAGTTGGGGGCATTGGTATTGAGTCGCTAGAGGTGAAATTCTTGGATTGACTCAAGA 19120 Query 257 CTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGG 316 | |||||||||||||| || |||||||||||||||||||||| ||||||| |||||| Sbjct 19119 CCGACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGAAGGTTAGG 19061 Query 317 GG 318 || Sbjct 19060 GG 19059 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915196934080