Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F001700625.1_202016-08-08] 335 sequences; 41,818,685 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq151 437 4e-120 seq39 437 4e-120 seq121 167 1e-38 >seq151 Length=71382 Score = 437 bits (484), Expect = 4e-120 Identities = 513/685 (75%), Gaps = 44/685 (6%) Strand=Plus/Minus Query 35 TCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGC 94 |||| ||||||||||||||||||||||||||||||||||| |||||||| | |||||||| Sbjct 17311 TCGAAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGTGGTAAATTCCATCTAAAGC 17252 Query 95 TAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTT 154 |||||||||| |||||||||||||| ||||||| |||| ||||||||||||| |||| Sbjct 17251 TAAATATTGGGGAGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGATGAAAAGAACTT 17192 Query 155 TGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTT 214 |||||||||||||||| || ||||||||||| |||||||||| |||||| | ||| | Sbjct 17191 TGGAAAGAGAGTTAAACAGTACGTGAAATTGCTGAAAGGGAAACGCTTGAAGTCAGTCGC 17132 Query 215 GCCCGCAGTTGCTCAACCGGCCCCTCGGCCGGTGCACTCTTCTGCGGTCA---GGCCAGC 271 | | | | ||| || || || |||||| | | || | ||| || || | Sbjct 17131 GTTGGTCGGGGATCAGCCTTCCTTATGGTTGGTGCA-TTTCCT--GATCAACGGGTCAAC 17075 Query 272 ATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTGTTATA 331 ||||| | | ||||||| | || |||||| | |||| ||| |||||||| Sbjct 17074 ATCAGTTTTGATCAATGGATAAAAGTTTGAGGGATGTGG-CATCTTC-GGGTGTGTTATA 17017 Query 332 GCC-------------------CGGG---GTGGAATGCGGCCCGC--CTGGACTGAGGT- 366 || ||| | |||| | || ||| | | | | | | Sbjct 17016 ACCTCTTGCTATATACATTGATTGGGACTGAGGAACTCAGCACGCCGCAAGGCCGGGTTT 16957 Query 367 ----CCGCGCTCCGGC-TAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACA 421 || || || || ||||||| |||| |||||| | ||| || ||||||||| |||| Sbjct 16956 TTAACCACGTTCGTGCTTAGGATGTTGGCATAATGGCTTTAATCGACCCGTCTTGAAACA 16897 Query 422 CGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGA 481 |||||||||||||||||||| |||||||||||||||| ||||||| ||||| ||||| Sbjct 16896 CGGACCAAGGAGTCTAACATGCCTGCGAGTGTTTGGGTGGAAAACCCGAGCGCGCAATGA 16837 Query 482 AAGTGAACGGAGGTGGGAAC-CCGT-GAGG-GTGCACCATCGACCGATCCTGATGTCTTC 538 ||||||| || | ||| | | || | || | |||| || ||| || || | || Sbjct 16836 AAGTGAA---AGTTAGGATCTCTGTCGTGGAGAGCACTGACGCCCGGCCCAGACCTTTTG 16780 Query 539 GGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAA 598 || || | | |||||| ||||||||||||||||||||||||||||||||||| Sbjct 16779 TGACGGTGCCGCGGTTGAGCATGTATGTTGGGACCCGAAAGATGGTGAACTATGCCTGAA 16720 Query 599 TAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGA 658 |||||||||||||||||||||||||||||||||||| |||| ||||| |||||||||||| Sbjct 16719 TAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGTAGCGATTCTGACGTGCAAATCGA 16660 Query 659 TCGTCAAATTTGGGTATAGGGGCGA 683 ||||| ||||||||||||||||||| Sbjct 16659 TCGTCGAATTTGGGTATAGGGGCGA 16635 >seq39 Length=306756 Score = 437 bits (484), Expect = 4e-120 Identities = 513/685 (75%), Gaps = 44/685 (6%) Strand=Plus/Plus Query 35 TCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGC 94 |||| ||||||||||||||||||||||||||||||||||| |||||||| | |||||||| Sbjct 15140 TCGAAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGTGGTAAATTCCATCTAAAGC 15199 Query 95 TAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTT 154 |||||||||| |||||||||||||| ||||||| |||| ||||||||||||| |||| Sbjct 15200 TAAATATTGGGGAGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGATGAAAAGAACTT 15259 Query 155 TGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTT 214 |||||||||||||||| || ||||||||||| |||||||||| |||||| | ||| | Sbjct 15260 TGGAAAGAGAGTTAAACAGTACGTGAAATTGCTGAAAGGGAAACGCTTGAAGTCAGTCGC 15319 Query 215 GCCCGCAGTTGCTCAACCGGCCCCTCGGCCGGTGCACTCTTCTGCGGTCA---GGCCAGC 271 | | | | ||| || || || |||||| | | || | ||| || || | Sbjct 15320 GTTGGTCGGGGATCAGCCTTCCTTATGGTTGGTGCA-TTTCCT--GATCAACGGGTCAAC 15376 Query 272 ATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTGTTATA 331 ||||| | | ||||||| | || |||||| | |||| ||| |||||||| Sbjct 15377 ATCAGTTTTGATCAATGGATAAAAGTTTGAGGGATGTGG-CATCTTC-GGGTGTGTTATA 15434 Query 332 GCC-------------------CGGG---GTGGAATGCGGCCCGC--CTGGACTGAGGT- 366 || ||| | |||| | || ||| | | | | | | Sbjct 15435 ACCTCTTGCTATATACATTGATTGGGACTGAGGAACTCAGCACGCCGCAAGGCCGGGTTT 15494 Query 367 ----CCGCGCTCCGGC-TAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACA 421 || || || || ||||||| |||| |||||| | ||| || ||||||||| |||| Sbjct 15495 TTAACCACGTTCGTGCTTAGGATGTTGGCATAATGGCTTTAATCGACCCGTCTTGAAACA 15554 Query 422 CGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGA 481 |||||||||||||||||||| |||||||||||||||| ||||||| ||||| ||||| Sbjct 15555 CGGACCAAGGAGTCTAACATGCCTGCGAGTGTTTGGGTGGAAAACCCGAGCGCGCAATGA 15614 Query 482 AAGTGAACGGAGGTGGGAAC-CCGT-GAGG-GTGCACCATCGACCGATCCTGATGTCTTC 538 ||||||| || | ||| | | || | || | |||| || ||| || || | || Sbjct 15615 AAGTGAA---AGTTAGGATCTCTGTCGTGGAGAGCACTGACGCCCGGCCCAGACCTTTTG 15671 Query 539 GGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAA 598 || || | | |||||| ||||||||||||||||||||||||||||||||||| Sbjct 15672 TGACGGTGCCGCGGTTGAGCATGTATGTTGGGACCCGAAAGATGGTGAACTATGCCTGAA 15731 Query 599 TAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGA 658 |||||||||||||||||||||||||||||||||||| |||| ||||| |||||||||||| Sbjct 15732 TAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGTAGCGATTCTGACGTGCAAATCGA 15791 Query 659 TCGTCAAATTTGGGTATAGGGGCGA 683 ||||| ||||||||||||||||||| Sbjct 15792 TCGTCGAATTTGGGTATAGGGGCGA 15816 >seq121 Length=112394 Score = 167 bits (184), Expect = 1e-38 Identities = 113/127 (89%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 555 GAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAG 614 |||||| |||||||||| ||||||||||||||||||||||| ||||||||||||||| Sbjct 16860 GAGCATGTATGTTGGGACCTGAAAGATGGTGAACTATGCCTGATCAGGGTGAAGCCAGAG 16801 Query 615 GAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTA 674 |||||||||||||||||||| |||| ||||| ||||||||| || || |||||||||| Sbjct 16800 GAAACTCTGGTGGAGGCTCGTAGCGATTCTGATGTGCAAATCAATTGTTGAATTTGGGTA 16741 Query 675 TAGGGGC 681 ||||||| Sbjct 16740 TAGGGGC 16734 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079992814250