Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F001700625.1_202016-08-08] 335 sequences; 41,818,685 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq151 122 5e-26 seq39 122 5e-26 >seq151 Length=71382 Score = 122 bits (134), Expect = 5e-26 Identities = 105/124 (85%), Gaps = 6/124 (5%) Strand=Plus/Plus Query 1 AGCGACGTAGCCCCGTTCGCCGGGTCCACAAAGCCAATTCCGAAAGTTCTCACTAAGCCA 60 |||||| || ||||| ||||| ||| | |||||||| | || | |||||||||||| Sbjct 18326 AGCGACAGAGTGCCGTT-GCCGGCTCCCCGAAGCCAATCCGGAGAC--CTCACTAAGCCA 18382 Query 61 TTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCA 120 || || ||||||||| ||||||||||| |||||||||||||||||||||||| ||||||| Sbjct 18383 TT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAACGCA 18439 Query 121 AGCT 124 |||| Sbjct 18440 AGCT 18443 >seq39 Length=306756 Score = 122 bits (134), Expect = 5e-26 Identities = 105/124 (85%), Gaps = 6/124 (5%) Strand=Plus/Minus Query 1 AGCGACGTAGCCCCGTTCGCCGGGTCCACAAAGCCAATTCCGAAAGTTCTCACTAAGCCA 60 |||||| || ||||| ||||| ||| | |||||||| | || | |||||||||||| Sbjct 13637 AGCGACAGAGTGCCGTT-GCCGGCTCCCCGAAGCCAATCCGGAGAC--CTCACTAAGCCA 13581 Query 61 TTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCA 120 || || ||||||||| ||||||||||| |||||||||||||||||||||||| ||||||| Sbjct 13580 TT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAACGCA 13524 Query 121 AGCT 124 |||| Sbjct 13523 AGCT 13520 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300799055300