Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F001700625.1_202016-08-08] 335 sequences; 41,818,685 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq151 134 2e-29 seq121 111 3e-22 >seq151 Length=71382 Score = 134 bits (148), Expect = 2e-29 Identities = 105/123 (85%), Gaps = 2/123 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| | |||||| || ||||| |||||| ||||| || | |||| | Sbjct 14536 GTACGAGAGGAACCGTTCA-TTCAGA-TATTTGGTATTTGCGCCTGTCCGATCGGGCAAT 14479 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | |||||||||| |||||||||||||||||||||||||||||||| ||||| || ||| | Sbjct 14478 GGCGCGAAGCTATCATCTGCTGGATTATGGCTGAACGCCTCTAAGCCAGAACCCGTGCTA 14419 Query 121 GAA 123 ||| Sbjct 14418 GAA 14416 >seq121 Length=112394 Score = 111 bits (122), Expect = 3e-22 Identities = 100/123 (81%), Gaps = 2/123 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||| ||||||||||| || |||||| || ||||| |||||| ||||| | |||| | Sbjct 13230 GTATGAGAGGAACCGTTGA-TTCAGA-TATTTGGTATTTGCGCCTGTCCAATTGGGCAAT 13173 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | |||||||||| ||| |||||||||||||||||| ||||||||| | | | |||||| | Sbjct 13172 GGCGCGAAGCTATCATTTGCTGGATTATGGCTGAATGCCTCTAAGCCGGGACCCATGCTA 13113 Query 121 GAA 123 ||| Sbjct 13112 GAA 13110 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819197341440