Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F001700625.1_202016-08-08] 335 sequences; 41,818,685 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq47 188 6e-43 seq48 154 1e-32 seq34 96.9 3e-15 >seq47 Length=266373 Score = 188 bits (208), Expect = 6e-43 Identities = 374/548 (68%), Gaps = 13/548 (2%) Strand=Plus/Minus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||| |||||||| ||||| || || || |||||||| | ||| ||| | ||||| Sbjct 38482 ATATGGCAAATGTACAAGAAGGCCGAGGCCTCTTTCTGGACTGCGGAAGAGATGGATTTA 38423 Query 61147 TCCAAAGACATGAATGACTGGGA-----GCGTTTATCGAGCGGTGAACAACATTTCATTA 61201 || |||||| | |||||||| | || | || || | | |||| | ||||| Sbjct 38422 TCAAAAGACCTTCATGACTGGAACAACCGCCTGAAT-GA-CAGCGAACGATTCTTCATCT 38365 Query 61202 AACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAAC 61261 | ||| | |||||||||||||| || || || || ||||| |||||| | | |||| Sbjct 38364 CCCGTGTTCTCGCGTTCTTTGCCGCCTCTGATGGCATTGTCAACGAGAATCTTCTCGAAC 38305 Query 61262 GTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCA 61321 | ||| || | || || || || | ||||| ||||| |||||||| ||||||||| | Sbjct 38304 GCTTCTCGAACGAAGTACAGGTCGCTGAGGCACGTTGCTTCTACGGGTTCCAGATTATGA 38245 Query 61322 TGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGG 61381 ||||||| | ||||| |||| ||| | |||||||||| || ||||||| || | | Sbjct 38244 TGGAGAACATTCACTCCGAGACTTACTCTCTTCTCATCGACACATACATCAAAGACCCTG 38185 Query 61382 CGGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGG 61441 |||||||| | || |||| |||||||| || || | ||||| || || | Sbjct 38184 TCGAACGTGATTTCCTTTTTGATGCTATCGAGACTATTCCTTGCATCAAGCGCAAGGCCG 38125 Query 61442 ATTGGGCCTTCAATTGGATCA--CCAGTACA-ACGGCTACATTTGGTGAACGATTGCTGG 61498 | ||||| | ||||||| | ||| ||| | || || || || | | | Sbjct 38124 AGTGGGCTCTGCGCTGGATCAGTGACGAACACTCGGTT---TTCGGCGAGCGTCTCGTAG 38068 Query 61499 CATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGA 61558 | ||||| | || || || | || ||| ||| || || || | ||||||||| ||| Sbjct 38067 CCTTTGCTGCTGTTGAAGGCATTTTCTTCTCTGGCTCCTTCGCGTCCATCTTTTGGATGA 38008 Query 61559 AGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGG 61618 |||| |||||| | ||||| || || | ||| || ||| | || || || |||| Sbjct 38007 AGAAGCGTGGATTAATGCCTGGCTTGGCGTTCTCAAACGAGCTCATCAGTCGTGATGAGG 37948 Query 61619 GCATGCAT 61626 | |||||| Sbjct 37947 GTATGCAT 37940 >seq48 Length=263890 Score = 154 bits (170), Expect = 1e-32 Identities = 338/502 (67%), Gaps = 7/502 (1%) Strand=Plus/Plus Query 61090 TGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCC 61149 |||| |||||||| || || ||||| || |||||||| ||| ||| | || | | Sbjct 116259 TGGCAGATGTACAAGAAAGCAGAAGCATCGTTCTGGACCTCGGAAGAGATTGACCTCACT 116318 Query 61150 AAAGACATGAATGACTGG---GAGCGTTTATCGAGCGGTGAACAACATTTCATTAAACAT 61206 | || | |||||| ||||| ||| | | || | |||||||| | || Sbjct 116319 CATGATCTTGTCGACTGGAACGAGCGATTAAACAATGACGAGCGTCATTTCATCACCCAC 116378 Query 61207 GTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTC 61266 || | || ||||||||||| || ||||||||||| || || ||| | ||||| || || Sbjct 116379 GTCCTTGCATTCTTTGCCGCCTCTGACGGTATCGTGAACGAAAATCTGTTGGAGCGCTTT 116438 Query 61267 GCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAG 61326 | | || ||||||| | |||||||| | || || || ||||| || ||||| Sbjct 116439 TCAAACGAAGTGCAAGCAGCTGAGGCGCGCTACTTTTATGGGTTCCAAATAATGATGGAA 116498 Query 61327 AATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGAA 61386 || || || || || | ||| | | || |||||||| ||| ||| ||| | || Sbjct 116499 AACGTTCATTCTGAAACTTACTCTCTGCTTATCGATACATACGTCAAGGATCTTAATCAA 116558 Query 61387 CGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGG 61446 || | | | ||| | || || || || |||||| | ||||| ||||| || ||| Sbjct 116559 CGCGCATATCTCTTCGACGCAATAGAAACAATACCGTGCATCAAGCGCAAAGCCGACTGG 116618 Query 61447 GCCTTCAATTGGATCACCAGTACAACG--GCTACATTTGGTGAACGATTGCTGGCATTTG 61504 ||| |||| ||||| | | | |||| || || |||| || ||||| ||||||| | Sbjct 116619 GCCCTCAAATGGAT-ATCTGACAAACGAAGC-ACTTTTGCAGAGAGATTGGTGGCATTCG 116676 Query 61505 CGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAAC 61564 | | |||||||| | ||||| ||| ||||| || | || || ||||| ||||| | Sbjct 116677 CTGCTGTCGAGGGAATCTTTTTTTCTGGGTCGTTCGCTTCCATTTTCTGGTTAAAGAAGC 116736 Query 61565 GTGGACTTATGCCCGGTCTGAC 61586 | || || ||||| || || || Sbjct 116737 GCGGCCTGATGCCTGGCCTAAC 116758 Score = 95.1 bits (104), Expect = 1e-14 Identities = 127/174 (73%), Gaps = 2/174 (1%) Strand=Plus/Plus Query 61747 CCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCC 61806 || || |||||||| ||||||||| | | ||| ||| || ||| |||| ||||| Sbjct 116978 CCTGTGTCACTCATAGGCATGAATGCAAGTTTGATGCGGCAATACATTCAATTCGTTGCA 117037 Query 61807 GACCGTCTGTTGGTCGATTTGGGTAT-GAAGCGGATCTATAATACGAAAAACCCATTTGA 61865 ||||| ||| |||| | || ||| | ||| | | ||| || | | || || ||||| Sbjct 117038 GACCGACTGCTGGTAGCCTTAGGTGTCGAAAAGTA-CTACAACTCCACCAATCCTTTTGA 117096 Query 61866 TTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGTGT 61919 |||||||||||||| ||| || | ||||| || || || || ||||||||||| Sbjct 117097 CTTCATGGACATGATCTCGTTGCAAGGCAAAACCAACTTCTTTGAGAAACGTGT 117150 >seq34 Length=329079 Score = 96.9 bits (106), Expect = 3e-15 Identities = 160/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 66344 AATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCG 66403 || ||||| || ||||| || || ||||| | ||| || || || ||||| |||| Sbjct 277593 AAGAGATCCGGAATCCATAGAGCATAGAATAAATCACGGGCGCGCACTTCCTCTTTGCCA 277534 Query 66404 TGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATG 66463 ||||| || | ||| |||| | | | ||||| || |||||||| ||||| || ||||| Sbjct 277533 TGATTCTTCCTCAAATCGATCATCGCGAAGATATCAGCATGCCAAGGTTCGAGATAGATA 277474 Query 66464 GCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAG 66523 ||||| | || ||| ||| |||||||||||||| || || || | ||| | Sbjct 277473 GCGAAAGCCCCAGGACGCTTGTTACCACCTTGGTCGACATATCGTGCAGTAGCATTGTAC 277414 Query 66524 ACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATG 66574 | || | ||| || || | || || || | ||||| |||||| | ||| Sbjct 277413 GCCCGAAGCATTGGCACAATACCATTCGAGTACCCATTCGTGCCGGCAATG 277363 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397566376804400