Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F002000105.1_202017-02-13] 3,043 sequences; 40,928,581 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq886 183 2e-41 seq2556 159 3e-34 seq2440 140 3e-28 seq777 96.9 3e-15 >seq886 Length=61200 Score = 183 bits (202), Expect = 2e-41 Identities = 373/549 (68%), Gaps = 15/549 (3%) Strand=Plus/Plus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||| |||||||| ||||| || || || |||||||| | ||| ||| | ||||| Sbjct 11950 ATATGGCAAATGTACAAGAAGGCCGAGGCCTCTTTCTGGACTGCGGAAGAGATGGATTTA 12009 Query 61147 TCCAAAGACATGAATGACTGGGA-----GCGTTTATCGAGCGGTGAACAACATTTCATTA 61201 || |||||| | |||||||| | || | || || | | |||| | ||||| Sbjct 12010 TCAAAAGACCTTCATGACTGGAACAACCGCCTGAAT-GA-CAGCGAACGATTCTTCATCT 12067 Query 61202 AACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAAC 61261 | ||| | |||||||||||||| || || || || || || |||||| | | |||| Sbjct 12068 CCCGTGTCCTCGCGTTCTTTGCCGCCTCTGATGGCATTGTTAACGAGAATCTTCTCGAAC 12127 Query 61262 GTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCA 61321 | ||| || | || || || || | ||||| ||||| |||||||| ||||||||| | Sbjct 12128 GCTTCTCGAACGAAGTACAGGTCGCTGAGGCACGTTGCTTCTACGGGTTCCAGATTATGA 12187 Query 61322 TGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGG 61381 ||||||| | ||||| |||| ||| | |||||||||| || ||||||| || | | Sbjct 12188 TGGAGAACATTCACTCTGAGACTTACTCTCTTCTCATCGACACATACATCAAAGACCCTG 12247 Query 61382 CGGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGG 61441 |||||||| | || |||| |||||||| || || | ||||| || || | Sbjct 12248 TCGAACGTGATTTCCTTTTTGATGCTATCGAGACCATTCCTTGCATCAAGCGCAAGGCCG 12307 Query 61442 ATTGGGCCTTCAATTGGATC----ACCAGTACAACGGCTACATTTGGTGAACGATTGCTG 61497 | ||||| | |||||| | || || ||| | || || || || | | Sbjct 12308 AGTGGGCTCTGCGCTGGATCAGTGATGAGCAC-TCGGTT---TTCGGCGAGCGTCTCGTA 12363 Query 61498 GCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTG 61557 || ||||| | || || || | || ||| ||| || || || | ||||||||| || Sbjct 12364 GCCTTTGCTGCTGTTGAAGGCATTTTCTTCTCTGGCTCCTTCGCGTCCATCTTTTGGATG 12423 Query 61558 AAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAG 61617 ||||| |||||| | ||||| || || | ||| || ||| | || || || ||| Sbjct 12424 AAGAAGCGTGGATTAATGCCTGGCTTGGCGTTCTCAAACGAGCTCATCAGTCGTGATGAG 12483 Query 61618 GGCATGCAT 61626 || |||||| Sbjct 12484 GGTATGCAT 12492 >seq2556 Length=115598 Score = 159 bits (176), Expect = 3e-34 Identities = 339/502 (68%), Gaps = 7/502 (1%) Strand=Plus/Minus Query 61090 TGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCC 61149 |||| |||||||| || || ||||| || |||||||| ||| ||| | || | | Sbjct 99039 TGGCAGATGTACAAGAAAGCAGAAGCATCGTTCTGGACCTCGGAAGAGATTGACCTCACT 98980 Query 61150 AAAGACATGAATGACTGG---GAGCGTTTATCGAGCGGTGAACAACATTTCATTAAACAT 61206 | || | |||||| ||||| ||| | | || | |||||||| | ||| Sbjct 98979 CATGATCTTGTCGACTGGAACGAGCGATTAAACAATGACGAGCGTCATTTCATCACCCAT 98920 Query 61207 GTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTC 61266 || | || ||||||||||| || ||||||||||| || || ||| | ||||| || || Sbjct 98919 GTCCTTGCATTCTTTGCCGCCTCTGACGGTATCGTGAACGAAAATCTGTTGGAGCGCTTT 98860 Query 61267 GCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAG 61326 | | || ||||||| | |||||||| | || || || ||||| || ||||| Sbjct 98859 TCAAACGAAGTGCAAGCAGCTGAGGCGCGCTACTTTTATGGGTTCCAAATAATGATGGAA 98800 Query 61327 AATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGAA 61386 || || || || || | ||| | | || |||||||| ||| ||| ||| | || Sbjct 98799 AACGTTCATTCTGAAACTTACTCTCTGCTTATCGATACATACGTCAAGGATCTTAATCAA 98740 Query 61387 CGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGG 61446 || | | | ||| | || || || || |||||| | ||||| ||||| || ||| Sbjct 98739 CGCGCATATCTCTTCGACGCAATAGAAACAATACCGTGCATCAAGCGCAAAGCCGACTGG 98680 Query 61447 GCCTTCAATTGGATCACCAGTACAACG--GCTACATTTGGTGAACGATTGCTGGCATTTG 61504 ||| |||| ||||| | | | |||| || || |||| || ||||| ||||||| | Sbjct 98679 GCCCTCAAATGGAT-ATCTGACAAACGAAGC-ACTTTTGCAGAGAGATTGGTGGCATTCG 98622 Query 61505 CGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAAC 61564 | | |||||||| | ||||| ||| ||||| || | || || ||||| ||||| | Sbjct 98621 CTGCTGTCGAGGGAATCTTTTTTTCTGGGTCGTTCGCTTCCATTTTCTGGTTAAAGAAGC 98562 Query 61565 GTGGACTTATGCCCGGTCTGAC 61586 | || || ||||| || || || Sbjct 98561 GCGGCCTGATGCCTGGCCTAAC 98540 Score = 91.5 bits (100), Expect = 1e-13 Identities = 126/174 (72%), Gaps = 2/174 (1%) Strand=Plus/Minus Query 61747 CCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCC 61806 || || |||||||| ||||||||| | | ||| || || ||| |||| ||||| Sbjct 98320 CCTGTGTCACTCATAGGCATGAATGCAAGTTTGATGCGACAATACATTCAATTCGTTGCA 98261 Query 61807 GACCGTCTGTTGGTCGATTTGGGTAT-GAAGCGGATCTATAATACGAAAAACCCATTTGA 61865 ||||| ||| |||| | || ||| | ||| | | ||| || | | || || ||||| Sbjct 98260 GACCGACTGCTGGTAGCCTTAGGTGTCGAAAAGTA-CTACAACTCCACCAATCCTTTTGA 98202 Query 61866 TTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGTGT 61919 |||||||||||||| ||| || | ||||| || || || || ||||||||||| Sbjct 98201 CTTCATGGACATGATCTCGTTGCAAGGCAAAACCAACTTCTTTGAGAAACGTGT 98148 >seq2440 Length=22844 Score = 140 bits (154), Expect = 3e-28 Identities = 333/494 (67%), Gaps = 11/494 (2%) Strand=Plus/Plus Query 61097 TGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACA 61156 ||||||||||||| | || || || ||||| ||||| || || ||| | |||||||||| Sbjct 13984 TGTACAAAAAGGCTGTGGCATCTTTTTGGACAGTGGAAGAAGTGGATCTCTCCAAAGACA 14043 Query 61157 TGAATGACTGGGA-GCGTTTATC--GAGCGGTGAACAACATTTCATTAAACATGTGTTGG 61213 || |||||| | | | || | | ||||| || ||| || | ||| | | Sbjct 14044 ACAAGGACTGGAATACAGCTCTCAATAATGATGAACGTCACTTCGTTTGTCGTGTTATTG 14103 Query 61214 CGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAAC-GTTTCGCGCAG 61272 |||||||||| || |||||||||| |||||||| || ||| | | | ||| || | Sbjct 14104 CGTTCTTTGCTGCGGCGGACGGTATTGTCAATGAAAACTTAGTACAGCAATTTTGCTC-C 14162 Query 61273 GAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTC 61332 ||||| || | | || || ||||||||||||||||| || || ||||| ||| | Sbjct 14163 GAGGTTAAACTTCCTGAAGCTCGTTGTTTCTACGGCTTTCAAATCATGATGGAAAATATT 14222 Query 61333 CACTCGGAGATGTACAGTGTTCTCATCGATACGTACAT--CAGGGAGCGGGCGGAACGTG 61390 || ||||||||||| | | || ||| | || || || | | || | ||| Sbjct 14223 CATTCGGAGATGTATTCTTTGCTTATCCAAACCTATATTCCCAACACCGAAC--AACAAA 14280 Query 61391 AACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCT 61450 | | || || |||||||| || || || | | ||||| ||||| | Sbjct 14281 ACCACTTATTTTCCGCCATCGAAACCATCCCTTCTATTGCCAATAAAGCAACATGGGCTT 14340 Query 61451 TCAATTGGATC-ACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTG 61509 | || |||||| | | ||| ||| |||| ||||| | | |||||||| | Sbjct 14341 TGAAATGGATCGATTCGGCCAA-TCATACGTTTGCGGAACGGCTCGTCGCATTTGCAGCT 14399 Query 61510 GTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGA 61569 || ||||| | |||||| | | || |||||||||||||| |||||||||||| | || Sbjct 14400 GTTGAGGGACTCTTTTTCTCTAGTTCATTTGCCGCAATCTTCTGGTTGAAGAAAAGGGGG 14459 Query 61570 CTTATGCCCGGTCT 61583 |||||||| ||||| Sbjct 14460 CTTATGCCTGGTCT 14473 >seq777 Length=200876 Score = 96.9 bits (106), Expect = 3e-15 Identities = 160/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 66344 AATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCG 66403 || ||||| || ||||| || || ||||| | ||| || || || ||||| |||| Sbjct 115281 AAGAGATCCGGAATCCATAGAGCATAGAATAAATCACGGGCGCGCACTTCCTCTTTGCCA 115222 Query 66404 TGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATG 66463 ||||| || | ||| |||| | | | ||||| || |||||||| ||||| || ||||| Sbjct 115221 TGATTCTTCCTCAAATCGATCATCGCGAAGATATCAGCATGCCAAGGTTCGAGATAGATA 115162 Query 66464 GCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAG 66523 ||||| | || ||| ||| |||||||||||||| || || || | ||| | Sbjct 115161 GCGAAAGCCCCAGGACGCTTGTTACCACCTTGGTCGACATATCGTGCAGTAGCATTGTAC 115102 Query 66524 ACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATG 66574 | || | ||| || || | || || || | ||||| |||||| | ||| Sbjct 115101 GCCCGAAGCATTGGCACAATACCATTCGAGTACCCATTCGTGCCGGCAATG 115051 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397553255569520