Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F002003045.1_202017-02-02] 1,951 sequences; 39,922,873 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq1127 154 8e-36 >seq1127 Length=23621 Score = 154 bits (170), Expect = 8e-36 Identities = 107/119 (90%), Gaps = 3/119 (3%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCA--AAATGATAACATCGC 58 ||||||||||||||||||||||||||||||||||||||| || |||| | | |||| Sbjct 2540 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGACGCATCAAATT-TGAGGTCGC 2482 Query 59 CCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||| Sbjct 2481 CCGATCCCTAGTCGGCATAGTTTACTGTTAAGACTACAACGGTATCTGATCGTTTTCGA 2423 Score = 125 bits (138), Expect = 4e-27 Identities = 106/123 (86%), Gaps = 8/123 (7%) Strand=Plus/Minus Query 2 AACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCA--AAATGATAACATCGCC 59 |||||||||||||||||||||||||||||||||||||| || |||| | | ||||| Sbjct 12730 AACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGACGCATCAAAT-TTGAGGTCGCC 12672 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAA--GACTA-CGACGGTAT-CTGAT-CGTCTT 114 |||||||||||||||||||||||| ||||| ||||| | ||||||| ||||| ||| || Sbjct 12671 CGATCCCTAGTCGGCATAGTTTACTGTTAATGGACTAGCAACGGTATCCTGATGCGTTTT 12612 Query 115 CGA 117 ||| Sbjct 12611 CGA 12609 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278394907890