Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F002003045.1_202017-02-02] 1,951 sequences; 39,922,873 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq1127 437 4e-120 >seq1127 Length=23621 Score = 437 bits (484), Expect = 4e-120 Identities = 513/685 (75%), Gaps = 44/685 (6%) Strand=Plus/Plus Query 35 TCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGC 94 |||| ||||||||||||||||||||||||||||||||||| |||||||| | |||||||| Sbjct 4169 TCGAAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGTGGTAAATTCCATCTAAAGC 4228 Query 95 TAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTT 154 |||||||||| |||||||||||||| ||||||| |||| ||||||||||||| |||| Sbjct 4229 TAAATATTGGGGAGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGATGAAAAGAACTT 4288 Query 155 TGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTT 214 |||||||||||||||| || ||||||||||| |||||||||| |||||| | ||| | Sbjct 4289 TGGAAAGAGAGTTAAACAGTACGTGAAATTGCTGAAAGGGAAACGCTTGAAGTCAGTCGC 4348 Query 215 GCCCGCAGTTGCTCAACCGGCCCCTCGGCCGGTGCACTCTTCTGCGGTCA---GGCCAGC 271 | | | | ||| || || || |||||| | | || | ||| || || | Sbjct 4349 GTTGGTCGGGGATCAGCCTTCCTTATGGTTGGTGCA-TTTCCT--GATCAACGGGTCAAC 4405 Query 272 ATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTGTTATA 331 ||||| | | ||||||| | || |||||| | |||| ||| |||||||| Sbjct 4406 ATCAGTTTTGATCAATGGATAAAAGTTTGAGGGATGTGG-CATCTTC-GGGTGTGTTATA 4463 Query 332 GCC-------------------CGGG---GTGGAATGCGGCCCGC--CTGGACTGAGGT- 366 || ||| | |||| | || ||| | | | | | | Sbjct 4464 ACCTCTTGCTATATACATTGATTGGGACTGAGGAACTCAGCACGCCGCAAGGCCGGGTTT 4523 Query 367 ----CCGCGCTCCGGC-TAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACA 421 || || || || ||||||| |||| |||||| | ||| || ||||||||| |||| Sbjct 4524 TTAACCACGTTCGTGCTTAGGATGTTGGCATAATGGCTTTAATCGACCCGTCTTGAAACA 4583 Query 422 CGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGA 481 |||||||||||||||||||| |||||||||||||||| ||||||| ||||| ||||| Sbjct 4584 CGGACCAAGGAGTCTAACATGCCTGCGAGTGTTTGGGTGGAAAACCCGAGCGCGCAATGA 4643 Query 482 AAGTGAACGGAGGTGGGAAC-CCGT-GAGG-GTGCACCATCGACCGATCCTGATGTCTTC 538 ||||||| || | ||| | | || | || | |||| || ||| || || | || Sbjct 4644 AAGTGAA---AGTTAGGATCTCTGTCGTGGAGAGCACTGACGCCCGGCCCAGACCTTTTG 4700 Query 539 GGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAA 598 || || | | |||||| ||||||||||||||||||||||||||||||||||| Sbjct 4701 TGACGGTGCCGCGGTTGAGCATGTATGTTGGGACCCGAAAGATGGTGAACTATGCCTGAA 4760 Query 599 TAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGA 658 |||||||||||||||||||||||||||||||||||| |||| ||||| |||||||||||| Sbjct 4761 TAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGTAGCGATTCTGACGTGCAAATCGA 4820 Query 659 TCGTCAAATTTGGGTATAGGGGCGA 683 ||||| ||||||||||||||||||| Sbjct 4821 TCGTCGAATTTGGGTATAGGGGCGA 4845 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079958151050