Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F002003045.1_202017-02-02] 1,951 sequences; 39,922,873 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq1127 365 7e-99 >seq1127 Length=23621 Score = 365 bits (404), Expect = 7e-99 Identities = 235/257 (91%), Gaps = 0/257 (0%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2924 ACTCGCTGGCTCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 2865 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 |||||||||||||||||||||| | ||| || || | ||||||||||||||||| || Sbjct 2864 CCTGTTATTGCCTCAAACTTCCGTCAGCTAGACGCTGACAGTCCCTCTAAGAAGCCGGCG 2805 Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181 |||| || || || |||||||||||||||||||||||||||||||||||||||||| Sbjct 2804 ACCATCCGAAGACGGCCTGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 2745 Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| Sbjct 2744 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAAAATCATGAA 2685 Query 242 AGAGCTATCAATCTGTC 258 ||||||||||||||||| Sbjct 2684 AGAGCTATCAATCTGTC 2668 Score = 214 bits (236), Expect = 3e-53 Identities = 197/258 (76%), Gaps = 41/258 (16%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATC-ACAG 60 ||||| |||||| |||||||||||||||||||||||||||||||||||||||| | |||| Sbjct 13257 ACTCGCTGGCTCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCAACCACAG 13316 Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120 ||| ||||| ||| ||||| || || || || | |||||||||| Sbjct 13317 CCCTTTTATTCCCTAAAACTCCCGCCAGCAGGCCGCTGAC-GTCCCTCTAA--------- 13366 Query 121 CACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTA 180 |||||||||||||||||||||||||||||| Sbjct 13367 ------------------------------AGGTTAAGGTCTCGTTCGTTATCGGAATTA 13396 Query 181 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 240 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || Sbjct 13397 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAAAATCATGA 13456 Query 241 AAGAGCTATCAATCTGTC 258 |||||||||||||||||| Sbjct 13457 AAGAGCTATCAATCTGTC 13474 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796784940231