Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F002003045.1_202017-02-02] 1,951 sequences; 39,922,873 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq1127 122 5e-26 >seq1127 Length=23621 Score = 122 bits (134), Expect = 5e-26 Identities = 105/124 (85%), Gaps = 6/124 (5%) Strand=Plus/Minus Query 1 AGCGACGTAGCCCCGTTCGCCGGGTCCACAAAGCCAATTCCGAAAGTTCTCACTAAGCCA 60 |||||| || ||||| ||||| ||| | |||||||| | || | |||||||||||| Sbjct 3154 AGCGACAGAGTGCCGTT-GCCGGCTCCCCGAAGCCAATCCGGAGAC--CTCACTAAGCCA 3098 Query 61 TTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCA 120 || || ||||||||| ||||||||||| |||||||||||||||||||||||| ||||||| Sbjct 3097 TT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAACGCA 3041 Query 121 AGCT 124 |||| Sbjct 3040 AGCT 3037 Score = 118 bits (130), Expect = 6e-25 Identities = 97/112 (87%), Gaps = 6/112 (5%) Strand=Plus/Minus Query 13 CCGTTCGCCGGGTCCACAAAGCCAATTCCGAAAGTTCTCACTAAGCCATTTCATTCGGTA 72 ||||| ||||| ||| | |||||||| | || | |||||||||||||| || |||||| Sbjct 12907 CCGTT-GCCGGCTCCCCGAAGCCAATCCGGAGAC--CTCACTAAGCCATT-CAATCGGTA 12852 Query 73 GTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAGCT 124 ||| ||||||||||| |||||||||||||||||||||||| ||||||||||| Sbjct 12851 GTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAACGCAAGCT 12802 Score = 114 bits (126), Expect = 8e-24 Identities = 105/125 (84%), Gaps = 7/125 (6%) Strand=Plus/Plus Query 1 AGCGACGTAGCCCCGTTCGCCGGGTCCACAAAGCCAATTCCGAAAGTTCTCACTAA-GCC 59 |||||| || ||||| ||||| ||| | |||||||| | || | |||||||| ||| Sbjct 13026 AGCGACAGAGGGCCGTT-GCCGGCTCCCCGAAGCCAATCCGGAGAC--CTCACTAAAGCC 13082 Query 60 ATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGC 119 ||| || ||||||||| ||||||||||| |||||||||||||||||||||||| |||||| Sbjct 13083 ATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAACGC 13139 Query 120 AAGCT 124 ||||| Sbjct 13140 AAGCT 13144 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300794498180