Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F002003045.1_202017-02-02] 1,951 sequences; 39,922,873 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq1127 241 2e-61 >seq1127 Length=23621 Score = 241 bits (266), Expect = 2e-61 Identities = 174/199 (87%), Gaps = 3/199 (2%) Strand=Plus/Minus Query 1 CGTCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGT 60 || ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| Sbjct 12470 CGACTCTAGAAACCAACAAAATAGAACCGCACGTCCTATTTTATTATTCCATGCTAATGT 12411 Query 61 ATTCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCT 120 |||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 12410 ATTCAGGCATAGGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCC 12351 Query 121 C--CGCACACCAATGAA-GGCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTA 177 | ||||||||||| || |||| | |||||||||||||||| | || || | ||||| Sbjct 12350 CGACGCACACCAATAAAGGGCACGCCGGCTCACCAAGAGGTAAGACTCAGTCAGACAGTA 12291 Query 178 CTCGCCGTGAGGCGGACCA 196 | | ||||||||||||||| Sbjct 12290 CACACCGTGAGGCGGACCA 12272 Score = 210 bits (232), Expect = 3e-52 Identities = 158/182 (87%), Gaps = 4/182 (2%) Strand=Plus/Plus Query 1 CGTCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGT 60 || ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| Sbjct 1531 CGACTCTAGAAACCAACAAAATAGAACCGCACGTCCTATTTTATTATTCCATGCTAATGT 1590 Query 61 ATTCGGGCGTA-AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCC 119 |||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1591 ATTCAGGCATAGGGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCC 1650 Query 120 TC--CGCACACCAATGAA-GGCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGT 176 | ||||||||||| || |||| | |||||||||||||||| | || || | |||| Sbjct 1651 CCGACGCACACCAATAAAGGGCACGCCGGCTCACCAAGAGGTAAGACTCAGTCAGACAGT 1710 Query 177 AC 178 || Sbjct 1711 AC 1712 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595188750534