Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F002003045.1_202017-02-02] 1,951 sequences; 39,922,873 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq1127 452 7e-125 seq150 80.6 5e-13 >seq1127 Length=23621 Score = 452 bits (500), Expect = 7e-125 Identities = 287/310 (93%), Gaps = 1/310 (0%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || |||||||||||||||||||||||||||||| ||| || ||||||||||||||||| Sbjct 2759 GAACGAGACCTTAACCTGCTAAATAGCCAGGCCGTCTTCGGATGGTCGCCGGCTTCTTAG 2818 Query 80 AGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 138 ||||||| || || || ||| || |||||||||||||||||||||||||||||||||||| Sbjct 2819 AGGGACTGTCAGCGTCTAGCTGACGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 2878 Query 139 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCC 198 |||||||||||||||||||||||||||||||||||||||| |||||| | |||||||| Sbjct 2879 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAGCGAGTTTTTTTCCTTGGCC 2938 Query 199 GGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATT 258 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 2939 GGAAGGTCTGGGTAATCTTGTGAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATT 2998 Query 259 GCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCT 318 ||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||| Sbjct 2999 GCTCTTCAACGAGGAATACCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTACGTCCCT 3058 Query 319 GCCCTTTGTA 328 |||||||||| Sbjct 3059 GCCCTTTGTA 3068 Score = 325 bits (360), Expect = 7e-87 Identities = 209/227 (92%), Gaps = 1/227 (0%) Strand=Plus/Minus Query 103 GGAAGTTTGAGGCAATAACAGGTCTGTGAT-GCCCTTAGATGTTCTGGGCCGCACGCGCG 161 || ||||| ||| ||||| ||| ||||| | ||||||||||||||||||||||||||||| Sbjct 13339 GGGAGTTTTAGGGAATAAAAGGGCTGTGGTTGCCCTTAGATGTTCTGGGCCGCACGCGCG 13280 Query 162 CTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTA 221 ||||||||||||||||| |||||| | ||||||||||||||||||||||||||||| | Sbjct 13279 CTACACTGACAGAGCCAGCGAGTTTTTTTCCTTGGCCGGAAGGTCTGGGTAATCTTGTGA 13220 Query 222 AACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAG 281 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 13219 AACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATACCTAG 13160 Query 282 TAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 ||||||| ||||||||| ||||||||||||||||||||||||||| Sbjct 13159 TAAGCGCAAGTCATCAGCTTGCGTTGATTACGTCCCTGCCCTTTGTA 13113 Score = 104 bits (114), Expect = 4e-20 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 257 TTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCC 316 || |||||||||||||||| |||||||||||| ||||||||| ||||||||||||||| Sbjct 12762 TTACTCTTCAACGAGGAATACCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTACGTCC 12821 Query 317 CTGCCCTTTGTA 328 |||||||||||| Sbjct 12822 CTGCCCTTTGTA 12833 >seq150 Length=323728 Score = 80.6 bits (88), Expect = 5e-13 Identities = 56/60 (93%), Gaps = 3/60 (5%) Strand=Plus/Plus Query 216 TTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAAT 275 |||| |||||||| ||||| ||||||||||||||||||| |||||||||||||||||||| Sbjct 19654 TTGTGAAACTCTG-CGTGC-GGGGATAGAGCATTGCAAT-ATTGCTCTTCAACGAGGAAT 19710 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947181520128