Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F002003045.1_202017-02-02] 1,951 sequences; 39,922,873 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq1127 740 0.0 seq80 298 2e-78 >seq1127 Length=23621 Score = 740 bits (820), Expect = 0.0 Identities = 472/508 (93%), Gaps = 4/508 (1%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 |||||||||||||||| ||||||| |||||||||| ||| |||||||||||||||||| Sbjct 12137 GTACTCATTCCAATTATAAGACCCGAAAGAGCCCTATATTGTTATTTATTGTCACTACCT 12078 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 12077 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 12018 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| Sbjct 12017 TCTCAGGCTCCCTCTCCGGAATCGAACCCTTATTCCCCGTTACCCGTTGAAACCATGGTA 11958 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 |||| ||||||||||||||||||||||||||||||| ||||||||||| |||||||||| Sbjct 11957 GGCCTCTATCCTACCATCGAAAGTTGATAGGGCAGATATTTGAATGAAGCATCGCCGGCA 11898 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAG-GAGCCCCGAAGGGCGTTGG 299 ||||||||||||||||| ||||||||||||||||||||| |||| ||| ||||||| Sbjct 11897 CAAGGCCATGCGATTCGAGAAGTTATTATGAATCACCAAGTGAGCGGCGAGCCGCGTTGG 11838 Query 300 TTTTTTATCTAATAAATACACCCCTTCC-GAAGTCGGGGTTTTTA-GCATGTATTAGCTC 357 |||||||||||||||||||||||||||| ||||| |||| || | |||||||||||||| Sbjct 11837 TTTTTTATCTAATAAATACACCCCTTCCAGAAGTTGGGGCTTGAATGCATGTATTAGCTC 11778 Query 358 TAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAA 417 |||||||||||| ||||||||||||| |||||| ||||||||||| ||||||||||||| Sbjct 11777 TAGAATTACCACAGTTATCCATGTAGCAAGGTATCATCAAATAAACTATAACTGATTTAA 11718 Query 418 TGAGCCATTCGCAGTTTCACTGTATAGA-TTGCTTATACTTAGACATGCATGGCTTAATC 476 |||||||||||||||||||| ||| | | ||| ||||||||||||||||||||||||||| Sbjct 11717 TGAGCCATTCGCAGTTTCACAGTACAAATTTGTTTATACTTAGACATGCATGGCTTAATC 11658 Query 477 TTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||||| Sbjct 11657 TTTGAGACAAGCATATGACTACTGGCAG 11630 Score = 266 bits (294), Expect = 1e-68 Identities = 152/155 (98%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 59 CTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCG 118 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 13826 CTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCG 13885 Query 119 TTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGG 178 |||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| Sbjct 13886 TTTCTCAGGCTCCCTCTCCGGAATCGAACCCTTATTCCCCGTTACCCGTTGAAACCATGG 13945 Query 179 TAGGCCACTATCCTACCATCGAAAGTTGATAGGGC 213 |||||| |||||||||||||||||||||||||||| Sbjct 13946 TAGGCCTCTATCCTACCATCGAAAGTTGATAGGGC 13980 Score = 194 bits (214), Expect = 5e-47 Identities = 129/141 (91%), Gaps = 2/141 (1%) Strand=Plus/Plus Query 303 TTTATCTAATAAATACACCCCTTCC-GAAGTCGGGGTTTTTA-GCATGTATTAGCTCTAG 360 ||||||||||||||||||||||||| ||||| |||| || | ||||||||||||||||| Sbjct 1821 TTTATCTAATAAATACACCCCTTCCAGAAGTTGGGGCTTGAATGCATGTATTAGCTCTAG 1880 Query 361 AATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 420 ||||||||| ||||||||||||| |||||| ||||||||||| |||||||||||||||| Sbjct 1881 AATTACCACAGTTATCCATGTAGCAAGGTATCATCAAATAAACTATAACTGATTTAATGA 1940 Query 421 GCCATTCGCAGTTTCACTGTA 441 ||||||||||||||||| ||| Sbjct 1941 GCCATTCGCAGTTTCACAGTA 1961 Score = 167 bits (184), Expect = 7e-39 Identities = 108/117 (92%), Gaps = 1/117 (1%) Strand=Plus/Plus Query 379 TGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACT 438 ||||| |||||| ||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 13981 TGTAGCAAGGTATCATCAAATAAACTATAACTGATTTAATGAGCCATTCGCAGTTTCACA 14040 Query 439 GTATAGA-TTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGA 494 ||| | | ||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 14041 GTACAAATTTGTTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGA 14097 >seq80 Length=152741 Score = 298 bits (330), Expect = 2e-78 Identities = 387/502 (77%), Gaps = 61/502 (12%) Strand=Plus/Minus Query 45 TTTATTGTCACTACCTCCCC----GTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTT 100 ||| |||||||||||||| | ||||||||||||||||||||||||||||| |||||| Sbjct 70981 TTTTTTGTCACTACCTCCGCTCTCGTGTCGGGATTGGGTAATTTGCGCGCCTG-TGCCTT 70923 Query 101 CCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAA--TCGAAC---CCTAATTC 155 ||||||||||||||| |||||||||||||||||| | || ||||| ||| |||| Sbjct 70922 CCTTGGATGTGGTAGGTGTTTCTCAGGCTCCCTCTTCCGACATTCGAATTTGCCTTATTC 70863 Query 156 CCCGTTACCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAG 215 || |||||||||||| |||| | | | | ||||||||||||||||||||| |||||||| Sbjct 70862 CC-GTTACCCGTTGAAACCA-GATGGTGCTCTATCCTACCATCGAAAGTTG-TAGGGCAG 70806 Query 216 AAATTTGAATGAACCATCGCCGGCTCAAGGCCATGCGATTCGTTAAGTTATTATGAATCA 275 | ||| ||||||| |||||||| | |||||| |||||| || |||||||| ||||||| Sbjct 70805 ATATT-GAATGAAGCATCGCCG-CACAAGGCATTGCGAT-CGAGAAGTTATTTTGAATCA 70749 Query 276 CCAAG--GAGCCCCG-----AAGG--GCGT--TGGTTTTTTAT-----CTAATAAATACA 319 | ||| |||| || | || |||| |||| |||| | ||| ||| || Sbjct 70748 CAAAGTGGAGCGGCGGTCAAATGGACGCGTGATGGTCTTTTCTTATCTCTAGCCAATTCA 70689 Query 320 CCCCTTCC-GAAGTCGGGGTTTTTA-GCATGTATTAGCTCT-AGAATTACCACGGTTATC 376 | |||| ||||| |||| || || ||||||||||||||| ||||||||||| || ||| Sbjct 70688 CG--TTCCAGAAGTTGGGGCTTGTATGCATGTATTAGCTCTTAGAATTACCACAGTGATC 70631 Query 377 ---CATGTAGTAAGGTACTATCAAATAAA-----CGATAACTGATTTAATGAGCCATTCG 428 |||||| ||||| ||| ||| | | |||||||||||||||||||| ||| Sbjct 70630 ATCCATGTATGCAGGTA---TCATATAGATCTTACTATAACTGATTTAATGAGCCA-TCG 70575 Query 429 CAG-TTTCAC---TGTATAGATTG-CTTATACTTAGA--CATGCATGGCTTAATCTTTGA 481 ||| |||||| || ||| ||| | ||| |||||| |||||||| || ||||| Sbjct 70574 CAGTTTTCACACGTGCATAATTTGTCATAT-CTTAGAACAATGCATGG-TTCATCTTGTT 70517 Query 482 GACAA-GC-ATATGAC-TACTG 500 ||||| || ||||||| ||||| Sbjct 70516 GACAATGCTATATGACTTACTG 70495 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510370532096