Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F002003045.1_202017-02-02] 1,951 sequences; 39,922,873 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq35 194 1e-44 seq482 154 1e-32 seq109 123 2e-23 seq51 96.9 3e-15 >seq35 Length=211330 Score = 194 bits (214), Expect = 1e-44 Identities = 375/548 (68%), Gaps = 13/548 (2%) Strand=Plus/Plus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||| |||||||| ||||| || || || |||||||| | ||| ||| | ||||| Sbjct 159560 ATATGGCAAATGTACAAGAAGGCCGAGGCCTCTTTCTGGACTGCGGAAGAGATGGATTTA 159619 Query 61147 TCCAAAGACATGAATGACTGGGA-----GCGTTTATCGAGCGGTGAACAACATTTCATTA 61201 || |||||| | |||||||| | || | || || | | |||| | ||||| Sbjct 159620 TCAAAAGACCTTCATGACTGGAACAACCGCCTGAAT-GA-CAGCGAACGATTCTTCATCT 159677 Query 61202 AACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAAC 61261 | ||| | |||||||||||||| || || || || ||||| |||||| | | |||| Sbjct 159678 CCCGTGTCCTCGCGTTCTTTGCCGCCTCTGATGGCATTGTCAACGAGAATCTTCTCGAAC 159737 Query 61262 GTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCA 61321 | ||| || | || || || || | ||||||||||| |||||||| ||||||||| | Sbjct 159738 GCTTCTCGAACGAAGTACAGGTCGCTGAGGCGCGTTGCTTCTACGGGTTCCAGATTATGA 159797 Query 61322 TGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGG 61381 ||||||| | ||||| |||| ||| | |||||||||| || ||||||| || | | Sbjct 159798 TGGAGAACATTCACTCCGAGACTTACTCTCTTCTCATCGACACATACATCAAAGACCCTG 159857 Query 61382 CGGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGG 61441 |||||||| | || |||| |||||||| || || | ||||| || || | Sbjct 159858 TCGAACGTGATTTCCTTTTTGATGCTATCGAGACTATTCCTTGCATCAAGCGCAAGGCCG 159917 Query 61442 ATTGGGCCTTCAATTGGATCA--CCAGTACA-ACGGCTACATTTGGTGAACGATTGCTGG 61498 | ||||| | ||||||| | ||| ||| | || || || || | | | Sbjct 159918 AGTGGGCTCTGCGCTGGATCAGTGACGAACACTCGGTT---TTCGGCGAGCGTCTCGTAG 159974 Query 61499 CATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGA 61558 | ||||| | || || || | || ||| ||| || || || | ||||||||| ||| Sbjct 159975 CCTTTGCTGCTGTTGAAGGCATTTTCTTCTCTGGCTCCTTCGCGTCCATCTTTTGGATGA 160034 Query 61559 AGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGG 61618 |||| |||||| | ||||| || || | ||| || ||| | || || || |||| Sbjct 160035 AGAAGCGTGGATTAATGCCTGGCTTGGCGTTCTCAAACGAGCTCATCAGTCGTGATGAGG 160094 Query 61619 GCATGCAT 61626 | |||||| Sbjct 160095 GTATGCAT 160102 >seq482 Length=177074 Score = 154 bits (170), Expect = 1e-32 Identities = 338/502 (67%), Gaps = 7/502 (1%) Strand=Plus/Minus Query 61090 TGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCC 61149 |||| |||||||| || || ||||| || |||||||| ||| ||| | || | | Sbjct 124670 TGGCAGATGTACAAGAAAGCAGAAGCATCGTTCTGGACCTCGGAAGAGATTGACCTCACT 124611 Query 61150 AAAGACATGAATGACTGG---GAGCGTTTATCGAGCGGTGAACAACATTTCATTAAACAT 61206 | || | |||||| ||||| ||| | | || | |||||||| | || Sbjct 124610 CATGATCTTGTCGACTGGAACGAGCGATTAAACAATGACGAGCGTCATTTCATCACCCAC 124551 Query 61207 GTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTC 61266 || | || ||||||||||| || ||||||||||| || || ||| | ||||| || || Sbjct 124550 GTCCTTGCATTCTTTGCCGCCTCTGACGGTATCGTGAACGAAAATCTGTTGGAGCGCTTT 124491 Query 61267 GCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAG 61326 | | || ||||||| | |||||||| | || || || ||||| || ||||| Sbjct 124490 TCAAACGAAGTGCAAGCAGCTGAGGCGCGCTACTTTTATGGGTTCCAAATAATGATGGAA 124431 Query 61327 AATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGAA 61386 || || || || || | ||| | | || |||||||| ||| ||| ||| | || Sbjct 124430 AACGTTCATTCTGAAACTTACTCTCTGCTTATCGATACATACGTCAAGGATCTTAATCAA 124371 Query 61387 CGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGG 61446 || | | | ||| | || || || || |||||| | ||||| ||||| || ||| Sbjct 124370 CGCGCATATCTCTTCGACGCAATAGAAACAATACCGTGCATCAAGCGCAAAGCCGACTGG 124311 Query 61447 GCCTTCAATTGGATCACCAGTACAACG--GCTACATTTGGTGAACGATTGCTGGCATTTG 61504 ||| |||| ||||| | | | |||| || || |||| || ||||| ||||||| | Sbjct 124310 GCCCTCAAATGGAT-ATCTGACAAACGAAGC-ACTTTTGCAGAGAGATTGGTGGCATTCG 124253 Query 61505 CGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAAC 61564 | | |||||||| | ||||| ||| ||||| || | || || ||||| ||||| | Sbjct 124252 CTGCTGTCGAGGGAATCTTTTTTTCTGGGTCGTTCGCTTCCATTTTCTGGTTAAAGAAGC 124193 Query 61565 GTGGACTTATGCCCGGTCTGAC 61586 | || || ||||| || || || Sbjct 124192 GCGGCCTGATGCCTGGCCTAAC 124171 Score = 95.1 bits (104), Expect = 1e-14 Identities = 127/174 (73%), Gaps = 2/174 (1%) Strand=Plus/Minus Query 61747 CCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCC 61806 || || |||||||| ||||||||| | | ||| ||| || ||| |||| ||||| Sbjct 123951 CCTGTGTCACTCATAGGCATGAATGCAAGTTTGATGCGGCAATACATTCAATTCGTTGCA 123892 Query 61807 GACCGTCTGTTGGTCGATTTGGGTAT-GAAGCGGATCTATAATACGAAAAACCCATTTGA 61865 ||||| ||| |||| | || ||| | ||| | | ||| || | | || || ||||| Sbjct 123891 GACCGACTGCTGGTAGCCTTAGGTGTCGAAAAGTA-CTACAACTCCACCAATCCTTTTGA 123833 Query 61866 TTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGTGT 61919 |||||||||||||| ||| || | ||||| || || || || ||||||||||| Sbjct 123832 CTTCATGGACATGATCTCGTTGCAAGGCAAAACCAACTTCTTTGAGAAACGTGT 123779 >seq109 Length=35798 Score = 123 bits (136), Expect = 2e-23 Identities = 368/558 (66%), Gaps = 11/558 (2%) Strand=Plus/Minus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 |||||| ||||||||||| || || | || |||||||| ||| ||| | ||| | Sbjct 3437 ATTTGGTCAATGTACAAAAAAGCTCAATCGTCATTCTGGACATCGGAAGAGATTGATCTT 3378 Query 61147 TCCAAAGACATGAATGACTGGGAGCGTTTATCGAGCGGTGAACA-ACATT--TCATTAAA 61203 || || ||||| || |||||| | | | || | | | | ||| || || Sbjct 3377 TCGAATGACATCAACGACTGGAATAACAAACTCAACGCTAATGAGAAATTCTTCGTTTCT 3318 Query 61204 CATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAAT-TTATTGGAACG 61262 | || ||||||||||||| || ||||| ||||| || || |||||| | ||| | | Sbjct 3317 CGCGTCCTGGCGTTCTTTGCTGCGTCGGATGGTATTGTAAACGAGAATCTGATTTG-TCA 3259 Query 61263 TTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCAT 61322 ||| | | || | || ||| |||||||||| |||||||| || ||||||||| || Sbjct 3258 TTTTTCCAACGAAATACAGGTGCCGGAGGCGCGGTGTTTCTATGGTTTCCAGATTATGAT 3199 Query 61323 GGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGC 61382 ||||||| | || || || | ||| | | || || | || || || | | | Sbjct 3198 GGAGAATATTCATTCTGAAACCTACTCTTTGCTTATTCAAACATATATTCGAAATGCACC 3139 Query 61383 GGAACGTGAACGA--TTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCG 61440 || ||| ||| || ||||| | || || || || ||| | || | ||||| Sbjct 3138 AGAGCGT--TCGATGTTATTCAACTCTATTGAAACTATTCCGTGCATCAATAGAAAAGCA 3081 Query 61441 GATTGGGC-CTTCAATTGGATCACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGC 61499 | ||||| ||||| | | ||| | | || | || |||| || || ||| | || Sbjct 3080 AAATGGGCGCTTCAGTGGATTCAAGATAATAAATTC-ACTTTTGCAGAGCGTTTGGTAGC 3022 Query 61500 ATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAA 61559 |||||| | | |||| || | |||||| || ||||||||| || |||||| |||| Sbjct 3021 ATTTGCAGCGATCGAAGGCATTTTTTTCTCTGCGTCGTTTGCCTGCATATTTTGGATGAA 2962 Query 61560 GAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGG 61619 |||||| ||| | ||||| ||| |||| || ||||| | || |||| || || Sbjct 2961 GAAACGAGGATTGATGCCGGGTTTGACATTTTCAAATGAACTCATTAGCTGCGATGAAGG 2902 Query 61620 CATGCATTGTGATTTTGC 61637 |||||| || ||||| Sbjct 2901 AATGCATACCGAATTTGC 2884 >seq51 Length=295103 Score = 96.9 bits (106), Expect = 3e-15 Identities = 160/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 66344 AATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCG 66403 || ||||| || ||||| || || ||||| | ||| || || || ||||| |||| Sbjct 220748 AAGAGATCCGGAATCCATAGAGCATAGAATAAATCACGGGCGCGCACTTCCTCTTTGCCA 220689 Query 66404 TGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATG 66463 ||||| || | ||| |||| | | | ||||| || |||||||| ||||| || ||||| Sbjct 220688 TGATTCTTCCTCAAATCGATCATCGCGAAGATATCAGCATGCCAAGGTTCGAGATAGATA 220629 Query 66464 GCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAG 66523 ||||| | || ||| ||| |||||||||||||| || || || | ||| | Sbjct 220628 GCGAAAGCCCCAGGACGCTTGTTACCACCTTGGTCGACATATCGTGCAGTAGCATTGTAC 220569 Query 66524 ACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATG 66574 | || | ||| || || | || || || | ||||| |||||| | ||| Sbjct 220568 GCCCGAAGCATTGGCACAATACCATTCGAGTACCCATTCGTGCCGGCAATG 220518 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397558546702640