Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lentinus_20polychrous_20[genbank_20GCA_5F000787475.1_202014-11-26]
10,349 sequences; 38,054,542 total letters
Query= AAMG01000140.1
Length=336
Score E
Sequences producing significant alignments: (Bits) Value
seq9096 334 1e-89
seq8079 215 1e-53
>seq9096
Length=1966
Score = 334 bits (370), Expect = 1e-89
Identities = 269/322 (84%), Gaps = 2/322 (1%)
Strand=Plus/Plus
Query 15 GGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAGTGATTCGGTGA 74
|||||||||||| |||||| ||| |||||||||||||||||||| || |||||
Sbjct 80 GGGTGAAATAGAACCTGAAACCGTACGCCTACAAGCGGTCGGAGCACCTATATGGGGTGA 139
Query 75 CGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAAGGGCTT 134
|||||||||||||||||||||||||||||||||| | | || ||||||||||||| |||
Sbjct 140 CGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAATTTT-ACTAGCGAGGTTAAGGACTT 198
Query 135 CAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGGTGGCGCTAGA 194
|||| ||| ||||| || ||||||||| || || |||||| |||| || | ||||
Sbjct 199 CAGGTCCGG-AGCCGGAGCGAAAGCGAGTCTGAATAGGGCGCATAGTTAGTAGGATTAGA 257
Query 195 CGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATGGAGGA 254
||||||||| ||||||||||||| | ||||||||||| |||||| | |||||||
Sbjct 258 CGCGAAACCGTGTGATCTACCCATGGGCAGGTTGAAGCTCTGGTAACACAGAGTGGAGGA 317
Query 255 CCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGGCCAAT 314
|||||||||| |||||||||||| |||||||||| | |||||||||||||||||||||
Sbjct 318 CCGAACCGGTTGACGTTGAAAAGTCTTCGGATGACCTGTGGGTAGGGGTGAAAGGCCAAT 377
Query 315 CAAACTGGGAAATAGCTCGTAC 336
|||||||||| |||||||||||
Sbjct 378 CAAACTGGGAGATAGCTCGTAC 399
>seq8079
Length=1626
Score = 215 bits (238), Expect = 1e-53
Identities = 254/334 (76%), Gaps = 10/334 (3%)
Strand=Plus/Minus
Query 4 CCCGAGCAGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAG 63
||||| ||||| |||||| || |||||| ||| || ||||||| || ||||||
Sbjct 1367 CCCGATGAGGGGAGTGAAACAGTACCTGAAACCGAATGCTTACAAGCAGTAGGAGCCTCT 1308
Query 64 TGATTCGGTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCA-GCGA 122
| | |||||| |||| ||| |||||||||| | | || ||| | || |||| ||||
Sbjct 1307 TTAGGGGGTGACTGCGTACCTCTTGCATAATGGGTCAGTGACTTAAT-GT-ACCATGCGA 1250
Query 123 GGTTAAGGGCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGAC-GAGT 181
| ||||| || ||| ||| || || ||||||||| || ||||||||||| ||||
Sbjct 1249 GCTTAAGCCGTT-AGGTG---TAGGCGCAGCGAAAGCGAGTCTGAACAGGGCGACAGAGT 1194
Query 182 -TGGTGGCGCTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAA 240
||||| ||||| ||||||| | |||||| || || |||||||||| |||||||
Sbjct 1193 ATGGTGTAT-TAGACCCGAAACCCGGCGATCTAGGCATGACCAGGTTGAAGGTGCGGTAA 1135
Query 241 CGCGTGATGGAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGG 300
| || ||||||||||||||||| || |||||||| || |||||||| | | | ||||
Sbjct 1134 CACGCACTGGAGGACCGAACCGGTGAATGTTGAAAAATTCTCGGATGAGTTGTGTTTAGG 1075
Query 301 GGTGAAAGGCCAATCAAACTGGGAAATAGCTCGT 334
||||||||||||||||| | ||||||||||| ||
Sbjct 1074 GGTGAAAGGCCAATCAAGCCGGGAAATAGCTGGT 1041
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 972699324928
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |