Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinus_20polychrous_20[genbank_20GCA_5F000787475.1_202014-11-26] 10,349 sequences; 38,054,542 total letters Query= AAMG01000140.1 Length=336 Score E Sequences producing significant alignments: (Bits) Value seq9096 334 1e-89 seq8079 215 1e-53 >seq9096 Length=1966 Score = 334 bits (370), Expect = 1e-89 Identities = 269/322 (84%), Gaps = 2/322 (1%) Strand=Plus/Plus Query 15 GGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAGTGATTCGGTGA 74 |||||||||||| |||||| ||| |||||||||||||||||||| || ||||| Sbjct 80 GGGTGAAATAGAACCTGAAACCGTACGCCTACAAGCGGTCGGAGCACCTATATGGGGTGA 139 Query 75 CGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAAGGGCTT 134 |||||||||||||||||||||||||||||||||| | | || ||||||||||||| ||| Sbjct 140 CGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAATTTT-ACTAGCGAGGTTAAGGACTT 198 Query 135 CAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGGTGGCGCTAGA 194 |||| ||| ||||| || ||||||||| || || |||||| |||| || | |||| Sbjct 199 CAGGTCCGG-AGCCGGAGCGAAAGCGAGTCTGAATAGGGCGCATAGTTAGTAGGATTAGA 257 Query 195 CGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATGGAGGA 254 ||||||||| ||||||||||||| | ||||||||||| |||||| | ||||||| Sbjct 258 CGCGAAACCGTGTGATCTACCCATGGGCAGGTTGAAGCTCTGGTAACACAGAGTGGAGGA 317 Query 255 CCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGGCCAAT 314 |||||||||| |||||||||||| |||||||||| | ||||||||||||||||||||| Sbjct 318 CCGAACCGGTTGACGTTGAAAAGTCTTCGGATGACCTGTGGGTAGGGGTGAAAGGCCAAT 377 Query 315 CAAACTGGGAAATAGCTCGTAC 336 |||||||||| ||||||||||| Sbjct 378 CAAACTGGGAGATAGCTCGTAC 399 >seq8079 Length=1626 Score = 215 bits (238), Expect = 1e-53 Identities = 254/334 (76%), Gaps = 10/334 (3%) Strand=Plus/Minus Query 4 CCCGAGCAGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAG 63 ||||| ||||| |||||| || |||||| ||| || ||||||| || |||||| Sbjct 1367 CCCGATGAGGGGAGTGAAACAGTACCTGAAACCGAATGCTTACAAGCAGTAGGAGCCTCT 1308 Query 64 TGATTCGGTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCA-GCGA 122 | | |||||| |||| ||| |||||||||| | | || ||| | || |||| |||| Sbjct 1307 TTAGGGGGTGACTGCGTACCTCTTGCATAATGGGTCAGTGACTTAAT-GT-ACCATGCGA 1250 Query 123 GGTTAAGGGCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGAC-GAGT 181 | ||||| || ||| ||| || || ||||||||| || ||||||||||| |||| Sbjct 1249 GCTTAAGCCGTT-AGGTG---TAGGCGCAGCGAAAGCGAGTCTGAACAGGGCGACAGAGT 1194 Query 182 -TGGTGGCGCTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAA 240 ||||| ||||| ||||||| | |||||| || || |||||||||| ||||||| Sbjct 1193 ATGGTGTAT-TAGACCCGAAACCCGGCGATCTAGGCATGACCAGGTTGAAGGTGCGGTAA 1135 Query 241 CGCGTGATGGAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGG 300 | || ||||||||||||||||| || |||||||| || |||||||| | | | |||| Sbjct 1134 CACGCACTGGAGGACCGAACCGGTGAATGTTGAAAAATTCTCGGATGAGTTGTGTTTAGG 1075 Query 301 GGTGAAAGGCCAATCAAACTGGGAAATAGCTCGT 334 ||||||||||||||||| | ||||||||||| || Sbjct 1074 GGTGAAAGGCCAATCAAGCCGGGAAATAGCTGGT 1041 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 972699324928