Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinus_20polychrous_20[genbank_20GCA_5F000787475.1_202014-11-26] 10,349 sequences; 38,054,542 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq167 414 2e-113 seq8083 125 1e-26 >seq167 Length=9215 Score = 414 bits (458), Expect = 2e-113 Identities = 281/313 (90%), Gaps = 2/313 (1%) Strand=Plus/Plus Query 7 GTCCGGCCGGGCCTTTCCTTCTGGGGATCCGC-ATGCCCTTCACTGGGTGTGCCGGGGAG 65 ||||||| ||| ||| ||| ||| || ||| |||||||||||||||||||||||||| Sbjct 5569 GTCCGGCTGGGTCTTACCTCTTGGTGAGCCGGTATGCCCTTCACTGGGTGTGCCGGGGAA 5628 Query 66 CCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATT 125 ||||||||||||| ||||||||||||||||||||||||||||||| ||| ||||||||| Sbjct 5629 CCAGGACTTTTACCTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTATGCCTGAATACATT 5688 Query 126 AGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTA 185 |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| Sbjct 5689 AGCATGGAATAATAAAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGAGTCGCCGTA 5748 Query 186 ATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGA 245 |||||||||||||||||| ||||| | |||||||| ||| |||||||||||||||||| Sbjct 5749 ATGATTAATAGGGATAGTTGGGGGCATTAGTATTCAGTTGCTAGAGGTGAAATTCTTGGA 5808 Query 246 TTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAA 305 |||| ||||||||||||||||||||||| || |||||||||||||||||||||| ||| Sbjct 5809 TTTACTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAA 5867 Query 306 CGAAAGTTAGGGG 318 |||| |||||||| Sbjct 5868 CGAAGGTTAGGGG 5880 >seq8083 Length=538 Score = 125 bits (138), Expect = 1e-26 Identities = 168/229 (73%), Gaps = 6/229 (3%) Strand=Plus/Plus Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTT--GCTCGAATACATTAGCATGG 132 |||| ||| |||| |||||||| ||||||||| | | ||| |||| | ||||||||| Sbjct 146 TTACCATGAGCAAATCAGAGTGTTTAAAGCAGGCTTATAAGCTTGAATGCGTTAGCATGG 205 Query 133 AATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTA 192 |||||| |||| | | | | | |||| |||||||| | | || | |||||| | Sbjct 206 AATAATGAAATACGGCTTTGGC--CGATTTCGTTGGTTTTTCAG-CCAAAGCAATGATGA 262 Query 193 ATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTG 252 ||||| || || ||||| | ||||| | | |||||||||||||||||||| | Sbjct 263 ATAGGAATGGTTGGGGGCATTTGTATTTGGTCGCTAGAGGTGAAATTCTTGGATTGACCA 322 Query 253 AAGACTAACTACTGCGAAAGC-GTTCACCAAGGATGTTTTCATTAATCA 300 ||||| ||| ||||||||||| || ||| |||| ||| |||| |||| Sbjct 323 AAGACAAACAACTGCGAAAGCATTTGACCCAGGACATTTCCATTGATCA 371 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915105285952