Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinus_20polychrous_20[genbank_20GCA_5F000787475.1_202014-11-26] 10,349 sequences; 38,054,542 total letters Query= AAMG01000538.1 Length=248 Score E Sequences producing significant alignments: (Bits) Value seq8079 149 9e-34 seq9096 127 3e-27 seq4143 91.5 2e-16 >seq8079 Length=1626 Score = 149 bits (164), Expect = 9e-34 Identities = 186/251 (74%), Gaps = 13/251 (5%) Strand=Plus/Plus Query 1 CTTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTA---CCGTCTTCG 57 |||| |||||| ||||||||||||||||| || ||||| ||| ||| ||| ||| | Sbjct 108 CTTAACCTTCCGGCACCGGGCAGGCGTCAGACCCTATACGTCGTCTTGAAGCCGACTTAG 167 Query 58 CACGGACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGC 117 || | ||||||||||| |||||||||||| ||| || || ||| || || ||| Sbjct 168 CAGAGTCCTGTGTTTTTGCTAAACAGTCGCTACCCCCTGGCCTGTGC--CCCCCGACAGT 225 Query 118 TCAACACGTCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCC 177 | | | || ||| | ||| | |||||| |||||| ||||| | || |||||| Sbjct 226 GC------TTGCGCAT-AGCCGGGGC-CTCCTTCTTCCGAAGGTACGGAGGCAATTTGCC 277 Query 178 GAATTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTC 237 || |||||| | | | ||| | | | |||||| |||| ||||||||||||||||||||| Sbjct 278 GAGTTCCTTCAGGATACTTCTCTCAAGCGCCTTGGTATACTCTACCTGACCACCTGTGTC 337 Query 238 GGTTTACGGTA 248 ||||| |||| Sbjct 338 GGTTTCGGGTA 348 >seq9096 Length=1966 Score = 127 bits (140), Expect = 3e-27 Identities = 172/242 (71%), Gaps = 21/242 (9%) Strand=Plus/Minus Query 1 CTTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCAC 60 |||| ||||||| ||||||||||| ||||| || |||||| | ||| | | || ||| Sbjct 1370 CTTAACCTTCCAGCACCGGGCAGGTGTCAGACCCTATACAGCATCTTTCGAT-TTAGCAG 1312 Query 61 GGACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCA 120 | ||||||||||| ||||||||||| | || ||| ||||| ||| || | Sbjct 1311 AGTCCTGTGTTTTTGATAAACAGTCGCCTGGGCCTCTTCACTGCGGCCAGCATTA----- 1257 Query 121 ACACGTCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAA 180 | || |||| ||||||| ||||||||||| | | |||||||| | Sbjct 1256 -------------CTGC--TGGCGTCCCTTCTTCCGAAGTTACGAGACTATTTTGCCTAG 1212 Query 181 TTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGT 240 ||||||| |||| |||| ||| | |||||| ||||||| | ||| |||||||||||| Sbjct 1211 TTCCTTAGCCACGACTCACTCGAGCACCTTAGGATTCTCTCCTCGACTACCTGTGTCGGT 1152 Query 241 TT 242 || Sbjct 1151 TT 1150 >seq4143 Length=9267 Score = 91.5 bits (100), Expect = 2e-16 Identities = 82/103 (80%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 140 TGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCAC 199 |||| | |||| |||||||||||||| | |||||||||| |||||||| | |||||| Sbjct 1090 TGGCCCTCCTTATCCCGAAGTTACGGATCTATTTTGCCGACTTCCTTAATGATTGTTCAC 1031 Query 200 CCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTT 242 | |||||||| |||| |||||| || ||| ||||| |||| Sbjct 1030 TCAAACGCCTTTGTATACTCTACTTGCTCACTTGTGTTAGTTT 988 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694330382277