Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lentinus_20polychrous_20[genbank_20GCA_5F000787475.1_202014-11-26]
10,349 sequences; 38,054,542 total letters
Query= AAMG01000538.1
Length=248
Score E
Sequences producing significant alignments: (Bits) Value
seq8079 149 9e-34
seq9096 127 3e-27
seq4143 91.5 2e-16
>seq8079
Length=1626
Score = 149 bits (164), Expect = 9e-34
Identities = 186/251 (74%), Gaps = 13/251 (5%)
Strand=Plus/Plus
Query 1 CTTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTA---CCGTCTTCG 57
|||| |||||| ||||||||||||||||| || ||||| ||| ||| ||| ||| |
Sbjct 108 CTTAACCTTCCGGCACCGGGCAGGCGTCAGACCCTATACGTCGTCTTGAAGCCGACTTAG 167
Query 58 CACGGACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGC 117
|| | ||||||||||| |||||||||||| ||| || || ||| || || |||
Sbjct 168 CAGAGTCCTGTGTTTTTGCTAAACAGTCGCTACCCCCTGGCCTGTGC--CCCCCGACAGT 225
Query 118 TCAACACGTCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCC 177
| | | || ||| | ||| | |||||| |||||| ||||| | || ||||||
Sbjct 226 GC------TTGCGCAT-AGCCGGGGC-CTCCTTCTTCCGAAGGTACGGAGGCAATTTGCC 277
Query 178 GAATTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTC 237
|| |||||| | | | ||| | | | |||||| |||| |||||||||||||||||||||
Sbjct 278 GAGTTCCTTCAGGATACTTCTCTCAAGCGCCTTGGTATACTCTACCTGACCACCTGTGTC 337
Query 238 GGTTTACGGTA 248
||||| ||||
Sbjct 338 GGTTTCGGGTA 348
>seq9096
Length=1966
Score = 127 bits (140), Expect = 3e-27
Identities = 172/242 (71%), Gaps = 21/242 (9%)
Strand=Plus/Minus
Query 1 CTTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCAC 60
|||| ||||||| ||||||||||| ||||| || |||||| | ||| | | || |||
Sbjct 1370 CTTAACCTTCCAGCACCGGGCAGGTGTCAGACCCTATACAGCATCTTTCGAT-TTAGCAG 1312
Query 61 GGACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCA 120
| ||||||||||| ||||||||||| | || ||| ||||| ||| || |
Sbjct 1311 AGTCCTGTGTTTTTGATAAACAGTCGCCTGGGCCTCTTCACTGCGGCCAGCATTA----- 1257
Query 121 ACACGTCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAA 180
| || |||| ||||||| ||||||||||| | | |||||||| |
Sbjct 1256 -------------CTGC--TGGCGTCCCTTCTTCCGAAGTTACGAGACTATTTTGCCTAG 1212
Query 181 TTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGT 240
||||||| |||| |||| ||| | |||||| ||||||| | ||| ||||||||||||
Sbjct 1211 TTCCTTAGCCACGACTCACTCGAGCACCTTAGGATTCTCTCCTCGACTACCTGTGTCGGT 1152
Query 241 TT 242
||
Sbjct 1151 TT 1150
>seq4143
Length=9267
Score = 91.5 bits (100), Expect = 2e-16
Identities = 82/103 (80%), Gaps = 0/103 (0%)
Strand=Plus/Minus
Query 140 TGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCAC 199
|||| | |||| |||||||||||||| | |||||||||| |||||||| | ||||||
Sbjct 1090 TGGCCCTCCTTATCCCGAAGTTACGGATCTATTTTGCCGACTTCCTTAATGATTGTTCAC 1031
Query 200 CCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTT 242
| |||||||| |||| |||||| || ||| ||||| ||||
Sbjct 1030 TCAAACGCCTTTGTATACTCTACTTGCTCACTTGTGTTAGTTT 988
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694330382277
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |