Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinus_20polychrous_20[genbank_20GCA_5F000787475.1_202014-11-26] 10,349 sequences; 38,054,542 total letters Query= AAMG01000599.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq9096 102 8e-20 seq8079 96.9 3e-18 >seq9096 Length=1966 Score = 102 bits (112), Expect = 8e-20 Identities = 89/111 (80%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 42 ATGCCGGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAA 101 |||| || || || | ||||| |||||||||||| |||||||||| ||||||| || Sbjct 1259 ATGCTGGCCGCAGTGAAGAGGCCCAGGCGACTGTTTATCAAAAACACAGGACTCTGCTAA 1318 Query 102 CACGAAAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 |||||| | ||||||||| |||| |||||||||||| |||||||||| Sbjct 1319 ATCGAAAGATGCTGTATAGGGTCTGACACCTGCCCGGTGCTGGAAGGTTAA 1369 >seq8079 Length=1626 Score = 96.9 bits (106), Expect = 3e-18 Identities = 75/89 (84%), Gaps = 4/89 (4%) Strand=Plus/Minus Query 68 GCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGA----AAGTGGACGTATAGGGT 123 ||||||||||| |||||||||| ||||||| || || ||| |||||||||||| Sbjct 197 GCGACTGTTTAGCAAAAACACAGGACTCTGCTAAGTCGGCTTCAAGACGACGTATAGGGT 138 Query 124 GTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 |||||||||||||||||||||||||||| Sbjct 137 CTGACGCCTGCCCGGTGCCGGAAGGTTAA 109 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476752197969