Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinus_20polychrous_20[genbank_20GCA_5F000787475.1_202014-11-26] 10,349 sequences; 38,054,542 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq9096 288 2e-75 seq8079 255 1e-65 seq4143 141 2e-31 >seq9096 Length=1966 Score = 288 bits (318), Expect = 2e-75 Identities = 316/419 (75%), Gaps = 30/419 (7%) Strand=Plus/Minus Query 2 GCGGATACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCG-GGTGGAGACAGC 60 |||| || | |||||||||| | | | ||||||||| ||| |||| || ||||||| Sbjct 1564 GCGGGTAATCGGCATCTTCACCGATACTACAATTTCACCGAG-CTCGTGGCTGAGACAGT 1506 Query 61 GCCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 120 ||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1505 GCCCAGATCGTTACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 1446 Query 121 TTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTA 180 ||||||||||||| |||||||||||||||||| |||||||| |||| ||||| ||| Sbjct 1445 TTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTCAGTCAATGCCTTCGAATTA 1386 Query 181 --GCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCAC 238 |||| | | | |||||||||| |||||||||||| |||| ||||||||| | | Sbjct 1385 CTTCTAAGCACCTTCCTTAACCTTCCAGCACCGGGCAGGTGTCAGACCCTATACAGCATC 1326 Query 239 TTTCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGA 298 ||||| || ||||||| |||||||||| |||||||||||| ||||| | || || Sbjct 1325 TTTCGATTTAGCAGAGTCCTGTGTTTTTGATAAACAGTCGCCTGGGCCTCTTCACTGCGG 1266 Query 299 CCGGCATGAGCTTACGGAGCAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTA 358 || ||| |||| | | |||| |||||| ||||||||| Sbjct 1265 CCAGCA-----TTACTG-------------------CTGGCGTCCCTTCTTCCGAAGTTA 1230 Query 359 CGGTGCCTTTTTGCCTAGTTCCTT-CCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCT 416 || | |||||||||||||||| || ||| || ||| ||| |||| | ||||||| Sbjct 1229 CGAGACTATTTTGCCTAGTTCCTTAGCCACGA-CTCACTCGAGCACCTTAGGATTCTCT 1172 >seq8079 Length=1626 Score = 255 bits (282), Expect = 1e-65 Identities = 269/354 (76%), Gaps = 29/354 (8%) Strand=Plus/Plus Query 78 ATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATTGTT 137 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 1 ATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTT 60 Query 138 ACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTAGCTAACCCCATCAATTA 197 |||||||||||||||||||||||| || |||||| || || || | ||| Sbjct 61 ACGGCCGCCGTTTACCGGGGCTTCAATTCGGAGCTT-GC--------ACTCCTCCTCTTA 111 Query 198 ACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTT----TCGTGTTTGCAGA 253 ||||||||||||||||||||||||| |||||||||||| ||| || || ||||| Sbjct 112 ACCTTCCGGCACCGGGCAGGCGTCAGACCCTATACGTCGTCTTGAAGCCGACTTAGCAGA 171 Query 254 GTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACCGGCATGAGCTTAC 313 || |||||||||| ||||||||||| | ||| ||| || || | Sbjct 172 GTCCTGTGTTTTTGCTAAACAGTCGCTACCCCCT-------------GGCCTGTGCCCCC 218 Query 314 GGAGCAAGTCCTTCACCCTCACCGGCG-CACCTTCTCCCGAAGTTACGGTGCCTTTTTGC 372 || ||| ||| | | |||| | | |||||| |||||| ||||| | | ||||| Sbjct 219 CGA--CAGTGCTTGCGCATAGCCGGGGCCTCCTTCTTCCGAAGGTACGGAGGCAATTTGC 276 Query 373 CTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACCCAACCAC 426 | ||||||||| | ||||||||||||||||||||| ||||||| ||||| Sbjct 277 CGAGTTCCTTCAGGATACTTCTCTCAAGCGCCTTGGTATACTCTACCTGACCAC 330 >seq4143 Length=9267 Score = 141 bits (156), Expect = 2e-31 Identities = 194/269 (72%), Gaps = 3/269 (1%) Strand=Plus/Minus Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTT 72 |||||| ||| || | ||||||||||||||||| | |||||||| |||||| Sbjct 1410 GCATCTGCACTGCTAATTCAATTTCACTGAGTCAATCATCGAGACAGCTGTTGTATCGTT 1351 Query 73 ACGCCATTCGTGCAG-GTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 131 | | ||||| |||| | | | | ||| | | ||||| ||| ||||||||||||||| || Sbjct 1350 ATGTCATTCATGCAAAGACCGCATTTAACGGCCAAGGTATTCCGCTACCTTAGGACCCTT 1291 Query 132 ATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCT--TCGCGTTAGCTAACCCC 189 || | || ||||||| || | ||||| | |||| | || | ||| ||| | Sbjct 1290 ATAGATAAGGCCGCCATTCATCGGGGTATTTGTCAAAACCTAATTAAATTAATTAAGCAA 1231 Query 190 ATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTG 249 ||| ||| || ||| || ||||||| |||||||| | |||| | | ||| | |||| Sbjct 1230 ATCTGTTACCCAACCGACATCGGGCAGACGTCACACTCAATACTTAGATTTTTATCTTTG 1171 Query 250 CAGAGTGCTGTGTTTTTAATAAACAGTCG 278 ||||||||| |||||| | |||||||||| Sbjct 1170 CAGAGTGCTTTGTTTTAATTAAACAGTCG 1142 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260669519808