Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinus_20polychrous_20[genbank_20GCA_5F000787475.1_202014-11-26] 10,349 sequences; 38,054,542 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq9096 363 3e-98 seq8079 251 2e-64 seq8958 80.6 6e-13 seq4143 75.2 2e-11 >seq9096 Length=1966 Score = 363 bits (402), Expect = 3e-98 Identities = 298/353 (84%), Gaps = 7/353 (2%) Strand=Plus/Minus Query 5 CGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCG 64 |||||||||||||| | ||||||||||||||| | | |||||||||||||| |||| Sbjct 1555 CGGCATCTTCACCGATACTACAATTTCACCGAGCTCGTGGCTGAGACAGTGCCCAGATCG 1496 Query 65 TTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGT 124 |||| || ||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 1495 TTACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGT 1436 Query 125 TATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTG-CTTCG-ATTGC-TCTAA-C 180 |||||||||||||||||||||||||||||| || ||| || ||||| ||| | ||||| | Sbjct 1435 TATAGTTACGGCCGCCGTTTACTGGGGCTTCAG-TCAATGCCTTCGAATTACTTCTAAGC 1377 Query 181 AGATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACT 240 | | ||||||||||||||||||||||||| ||||| |||||||| | |||| ||| | Sbjct 1376 ACCT-TCCTTAACCTTCCAGCACCGGGCAGGTGTCAGACCCTATACAGCATCTTTCGATT 1318 Query 241 TAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCTGTCAT 300 ||||||| |||||||||||| ||||||||||| ||||||| ||| |||||||| | | Sbjct 1317 TAGCAGAGTCCTGTGTTTTTGATAAACAGTCGCCTGGGCCTCTTCACTGCGGCCAGCATT 1258 Query 301 A-GACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTA 352 | | ||| ||||||| || |||||||| | |||||||| ||||||||| Sbjct 1257 ACTGCTGGCGTCCCTTCTTCCGAAGTTACGAGACTATTTTGCCTAGTTCCTTA 1205 >seq8079 Length=1626 Score = 251 bits (278), Expect = 2e-64 Identities = 241/307 (79%), Gaps = 24/307 (8%) Strand=Plus/Plus Query 73 TTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTA 132 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2 TTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTA 61 Query 133 CGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAACAGATCCCCTTAA 192 |||||||||||||| ||||||| | ||| || |||| || ||| ||||| Sbjct 62 CGGCCGCCGTTTACCGGGGCTTCAATTCGGAGC-----TTGC----ACTCCTCCTCTTAA 112 Query 193 CCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTG----CGACTTAGCAGAA 248 |||||| |||||||||||||||||| ||||||| |||||||| |||||||||||| Sbjct 113 CCTTCCGGCACCGGGCAGGCGTCAGACCCTATACGTCGTCTTGAAGCCGACTTAGCAGAG 172 Query 249 ACCTGTGTTTTTGGTAAACAGTCGCT-----TGGGCCTATTCTCTGCG-----GCCTG-T 297 |||||||||||| |||||||||||| ||||| | | | || || || Sbjct 173 TCCTGTGTTTTTGCTAAACAGTCGCTACCCCCTGGCCTGTGCCCCCCGACAGTGCTTGCG 232 Query 298 CATAGACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTAACAAT 357 ||||| | || | |||||| || ||| ||||| | || ||||||||||||||| | || Sbjct 233 CATAGCCGGGGCCTCCTTCTTCCGAAGGTACGGAGGCAATTTGCCGAGTTCCTTCAGGAT 292 Query 358 AGTTCTC 364 | ||||| Sbjct 293 ACTTCTC 299 >seq8958 Length=1973 Score = 80.6 bits (88), Expect = 6e-13 Identities = 101/139 (73%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 9 ATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTTAC 68 |||| ||| || || |||||||| || |||| | ||||||| |||||| | Sbjct 1364 ATCTGCACTGGTGATAGAATTTCACGCGGTTTATTCATAAGACAGTAGATCTATCGTTTC 1305 Query 69 GCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATA 128 || ||| |||||| | | ||| | ||||||||||||||||||||| ||||||| | Sbjct 1304 ACCATTCATGCGGGGCACCAATTAAGTGTCAAGGAATTTCGCTACCTTAGAACCGTTAGA 1245 Query 129 GTTACGGCCGCCGTTTACT 147 ||||| || ||| || ||| Sbjct 1244 GTTACAGCTGCCATTCACT 1226 >seq4143 Length=9267 Score = 75.2 bits (82), Expect = 2e-11 Identities = 105/146 (72%), Gaps = 1/146 (1%) Strand=Plus/Minus Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66 |||||| ||| | | | ||||||||| ||||| || | ||||||| |||||| Sbjct 1410 GCATCTGCACTGCTAATTCAATTTCACTGAGTCAATCATCGAGACAGCTGTTGTATCGTT 1351 Query 67 ACGCCTTTCGTGCGG-GTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 125 | | | ||| ||| | | | | ||| | | ||||| ||| ||||||||||||||| || Sbjct 1350 ATGTCATTCATGCAAAGACCGCATTTAACGGCCAAGGTATTCCGCTACCTTAGGACCCTT 1291 Query 126 ATAGTTACGGCCGCCGTTTACTGGGG 151 |||| || ||||||| || | |||| Sbjct 1290 ATAGATAAGGCCGCCATTCATCGGGG 1265 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1062290052224