Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinus_20polychrous_20[genbank_20GCA_5F000787475.1_202014-11-26] 10,349 sequences; 38,054,542 total letters Query= AAMG01001213.1 Length=600 Score E Sequences producing significant alignments: (Bits) Value seq9096 325 1e-86 seq8079 295 2e-77 >seq9096 Length=1966 Score = 325 bits (360), Expect = 1e-86 Identities = 390/520 (75%), Gaps = 25/520 (5%) Strand=Plus/Minus Query 54 GCATTCGGAGTTTGGTTGATTTCGGTAAGCTTGTGG-GCCCCCTAGACCATCCAGT-GCT 111 |||||||||||||| | | |||| || ||| |||||| ||| |||| ||| Sbjct 509 GCATTCGGAGTTTGTCAGGAATTGGTAGGCG-GTGAAGCCCCCGCATCCAATCAGTAGCT 451 Query 112 CTACCTCCGGG-AAGAAACACGCGACGCTGCACCTAAATGCATTTCGGGGAGAACCAGCT 170 ||||||| || | |||| |||||||||||||||||||||||||||| || |||| Sbjct 450 CTACCTCTATATAACTTATACGCAACGCTGCACCTAAATGCATTTCGGGGAGTACGAGCT 391 Query 171 ATCACGAAGTTTGATTGGCCTTTCACCCCTATCCACAGGTCATCCCCTCAGTTTTCAACC 230 ||| | |||||||||||||||||||||||| ||||||||||||| | |||||||| Sbjct 390 ATCTCCCAGTTTGATTGGCCTTTCACCCCTACCCACAGGTCATCCGAAGACTTTTCAACG 331 Query 231 TAAGTGGGTTCGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATGGATAGATC 290 | | ||||||||||||||| | || ||||| | |||||||||||||||||| |||||| Sbjct 330 TCAACCGGTTCGGTCCTCCACTCTGTGTTACCAGAGCTTCAACCTGCCCATGGGTAGATC 271 Query 291 ACTTCGCTTCGGGTCTTGATCGTGCCACTCATACGCCCTATTCGGACTCGCTTTCGCTAC 350 || | |||| ||| | ||| | | | || |||||||||| |||||||||||||| | Sbjct 270 ACACGGTTTCGCGTC-TAATCCTACTAACTATGCGCCCTATTCAGACTCGCTTTCGCTCC 212 Query 351 GGCTAC---CCCACACGGGTTAACCTCGCGACACAACGCAAACTCGCAGGCTCATTCTTC 407 |||| | || | |||||||||| | || |||||| ||||||||| | | Sbjct 211 GGCTCCGGACCTGAAGTCCTTAACCTCGCTA-GTAAAATTAACTCGTAGGCTCATTATGC 153 Query 408 AAAAGGCACGCCGTCACCTGGTACCTAAAAGGCACTTCAGCTCCGACGGATTGTAGGCAC 467 |||||||||||||||||| || | ||| |||||||| | |||||||| Sbjct 152 AAAAGGCACGCCGTCACC-----CCATATAGG------TGCTCCGACCGCTTGTAGGCGT 104 Query 468 ATGGTTTCAGGTACTATTTCACTCCCCGCCA---GGGGTACTTTTCACCTTTCCCTCACG 524 | |||||||||| |||||||| ||| | | | || |||||||||||||| |||| Sbjct 103 ACGGTTTCAGGTTCTATTTCA--CCCTTCTATTCGAAGTGCTTTTCACCTTTCCTTCACA 46 Query 525 GTACTTGTCCGCTATCGGTCACCAAGGAGTATTTAGGCTT 564 |||||||| | ||||||||| |||||||||||| ||| Sbjct 45 GTACTTGTTCACTATCGGTCTTTCAGGAGTATTTAGCCTT 6 >seq8079 Length=1626 Score = 295 bits (326), Expect = 2e-77 Identities = 399/550 (73%), Gaps = 16/550 (3%) Strand=Plus/Plus Query 53 GGCATTCGGAGTTTGGTTGATTTCGGTA-AGCTTGTGGGCCCCCTAGACCATCCAGTGCT 111 || ||||||||||||||| | | |||| | || | | ||||| ||||||||||||| Sbjct 930 GGTATTCGGAGTTTGGTTAGTATTGGTAGATCTCG-CGACCCCCGCAACCATCCAGTGCT 988 Query 112 CTACCTCCGGGAAGAAACACGCGACGCTGCACCTAAATGCATTTCGGGGAGAACCAGCTA 171 ||||| || | ||| ||||||| |||| ||| |||||| ||||||||||||| Sbjct 989 CTACCCCCAACGGCATACATTCGACGCTCTACCTCAATAGATTTCGCGGAGAACCAGCTA 1048 Query 172 TCACGAAGTTTGATTGGCCTTTCACCCCTATCCACAGGTCATCCCCTCAGTTTTCAACCT 231 | | | ||||||||||||||||||||| |||| |||||| | |||||||| | Sbjct 1049 TTTCCCGGCTTGATTGGCCTTTCACCCCTAAACACAACTCATCCGAGAATTTTTCAACAT 1108 Query 232 AAGTGGGTTCGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATGGATAGATCA 291 |||||||||||||| || ||||| |||||||||| |||| |||||| Sbjct 1109 TCACCGGTTCGGTCCTCCAGTGCGTGTTACCGCACCTTCAACCTGGTCATGCCTAGATCG 1168 Query 292 CTTCGCTTCGGGTCTTGATCGTGCCACTCATACGCCCTATTCGGACTCGCTTTCGCTACG 351 | | ||||||||| | |||| |||||| ||| |||||||||||||| || Sbjct 1169 CCGGGTTTCGGGTCTAATACACCATACTCTGTCGCCCTGTTCAGACTCGCTTTCGCTGCG 1228 Query 352 GCTACCCCACACGGGTTAACCTCGCGACACAACGCAAACTCGCAGGCTCATTCTTCAAAA 411 |||| || |||| |||| ||||| | || || || | | | |||| | ||| | Sbjct 1229 CCTACACCTAACGGCTTAAGCTCGC-ATGGTACATTAAGTCACTGACCCATTATGCAAGA 1287 Query 412 GGCACGCCGTCACCTGGTACCTAAAAGGCACTTCAGCTCCGACGGATTGTAGGCACATGG 471 || |||| |||||| |||||| | ||||| || | ||||| ||| || Sbjct 1288 GGTACGCAGTCACC----CCCTAAAGAG-------GCTCCTACTGCTTGTAAGCATTCGG 1336 Query 472 TTTCAGGTACTATTTCACTCCCCGC-CAGGGGTACTTTTCACCTTTCCCTCACGGTACT- 529 ||||||||||| ||||||||||| | ||||| ||||||||||||||||||||||||| Sbjct 1337 TTTCAGGTACTGTTTCACTCCCCTCATCGGGGTGCTTTTCACCTTTCCCTCACGGTACTG 1396 Query 530 TGTCCGCTATCGGTCACCAAGGAGTATTTAGGCTTAACGGGTGGTCCCGCCAGATTCACA 589 ||| |||||||||||| | |||||||||||||| |||||||||| ||| |||| | Sbjct 1397 TGTTCGCTATCGGTCATGTACGAGTATTTAGGCTTGGAGGGTGGTCCCCCCATGTTCAGA 1456 Query 590 CGAAATTTCA 599 | |||||| Sbjct 1457 CAGGATTTCA 1466 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1817411896576