Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinus_20polychrous_20[genbank_20GCA_5F000787475.1_202014-11-26] 10,349 sequences; 38,054,542 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq8079 298 1e-78 seq9096 242 9e-62 seq4142 75.2 3e-11 >seq8079 Length=1626 Score = 298 bits (330), Expect = 1e-78 Identities = 312/395 (79%), Gaps = 11/395 (3%) Strand=Plus/Plus Query 29 TTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTTACCCAACCTTTCAACCTGCC 88 ||||||||| | ||||||||||||||||| || |||||| ||||| ||||||| Sbjct 1098 TTTTTCAACATTCACCGGTTCGGTCCTCCAGTGCGT-GTTACCGCACCTT-CAACCTGGT 1155 Query 89 CATAGGATAGATCGCCCGGTTTTCGGGTCTATTTC-CCAGCGACTAGACGCCCTAGTAAG 147 ||| | ||||||||| ||||| |||||||| | | ||| || | |||||| | || Sbjct 1156 CAT-GCCTAGATCGCCGGGTTT-CGGGTCTAATACACCATACTCT-GTCGCCCTGTTCAG 1212 Query 148 ACTCGCTTTTCGCTACGCCTCC-CCTATTCGGTTAAGCTTTGCCACTGAAAATAAGTCGC 206 ||||||||| |||| ||||| | |||| | ||||||| || | | |||||| | Sbjct 1213 ACTCGCTTT-CGCTGCGCCTACACCTAACGGCTTAAGCTC-GCATGGTACATTAAGTCAC 1270 Query 207 TGACCCATTATACAAAAGGTACGCAGTCACCCAACAAAGTGGGCTCCCACTGCTTGTACG 266 ||||||||||| ||| |||||||||||||||| |||| || |||| |||||||||| | Sbjct 1271 TGACCCATTATGCAAGAGGTACGCAGTCACCCCCTAAAGAGG-CTCCTACTGCTTGTAAG 1329 Query 267 CATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCAC 326 ||| |||||||||| || ||||||||||||| |||||| |||||| |||||||||||| Sbjct 1330 CATTCGGTTTCAGGTACTGTTTCACTCCCCTCATCGGGGTGCTTTTCACCTTTCCCTCAC 1389 Query 327 GGTACT-AGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGGATGGTCCCCCCAT 385 |||||| |||| |||||||||| | ||||||||| |||||||| |||||||||||| Sbjct 1390 GGTACTGTGTTCGCTATCGGTCATGTACGAGTATTTAGGCTTGGAGGGTGGTCCCCCCAT 1449 Query 386 ATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTCG 420 |||||||| |||| |||| ||| |||||||| Sbjct 1450 GTTCAGACAGGATTTCACGTGTCCCGCCCTACTCG 1484 >seq9096 Length=1966 Score = 242 bits (268), Expect = 9e-62 Identities = 285/369 (77%), Gaps = 16/369 (4%) Strand=Plus/Minus Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68 ||||||||||| ||| |||||| ||||| | ||||||||||||||| | || ||| Sbjct 358 CCACAGGTCAT-CCGAAGACTTTT-CAACGTCAACCGGTTCGGTCCTCCACTCTGT-GTT 302 Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128 ||| | ||| |||||||||||| || |||||| | |||||| || ||||| | || | Sbjct 301 ACCAGAGCTT-CAACCTGCCCATGGG-TAGATCACACGGTTT-CGCGTCTAAT-CCTACT 246 Query 129 GACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCC---CCT--ATTCGGTTAAG 183 |||| ||||||| | ||||||||||| |||| || |||| ||| | || |||| Sbjct 245 AACTATGCGCCCTATTCAGACTCGCTTT-CGCTCCGGCTCCGGACCTGAAGTCC-TTAAC 188 Query 184 CTTTGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAA 243 || || | | ||| ||| ||| | | |||||| ||||||| |||| ||||||| | | Sbjct 187 CTC-GCTAGTAAAATTAACTCGTAGGCTCATTATGCAAAAGGCACGCCGTCACCCCATAT 129 Query 244 AGTGGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGG 303 || | ||||| || ||||||| || |||||||||||| |||||||||| | || | || Sbjct 128 AG-GTGCTCCGACCGCTTGTAGGCGTACGGTTTCAGGTTCTATTTCACCCTTCTATTCGA 70 Query 304 GGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAG 363 || |||||| ||||||| |||| ||||| |||||||||||||| |||| ||||||||| Sbjct 69 AGTGCTTTTCACCTTTCCTTCACAGTACTTGTTCACTATCGGTCTTTCAGGAGTATTTAG 10 Query 364 CCTTGGAGG 372 ||||||||| Sbjct 9 CCTTGGAGG 1 >seq4142 Length=8383 Score = 75.2 bits (82), Expect = 3e-11 Identities = 68/83 (82%), Gaps = 2/83 (2%) Strand=Plus/Minus Query 318 TTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGGATGGT 377 |||||||||||||||| |||||||||| | | | || |||||||| || ||||| ||| Sbjct 8112 TTCCCTCACGGTACTA-TTCACTATCGCTTATATATTA-TATTTAGCTTTAGAGGAAGGT 8055 Query 378 CCCCCCATATTCAGACAAAGTTT 400 |||| ||||||| ||||| ||| Sbjct 8054 TCCCCTATATTCAAACAAATTTT 8032 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1241471506816