Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinus_20polychrous_20[genbank_20GCA_5F000787475.1_202014-11-26] 10,349 sequences; 38,054,542 total letters Query= AAMG01002193.1 Length=560 Score E Sequences producing significant alignments: (Bits) Value seq9096 365 2e-98 seq8079 273 7e-71 >seq9096 Length=1966 Score = 365 bits (404), Expect = 2e-98 Identities = 404/529 (76%), Gaps = 7/529 (1%) Strand=Plus/Plus Query 2 CGAGTCCGAACAGGGCG-ACAGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCAT 60 |||||| ||| |||||| | ||| | || ||||| ||||||| ||||||||||||| Sbjct 222 CGAGTCTGAATAGGGCGCATAGTTAGTAGGATTAGACGCGAAACCGTGTGATCTACCCAT 281 Query 61 GGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAAT 120 || |||| ||||| | |||||||| |||||| ||||||| | | |||||||| | Sbjct 282 GGGCAGGTTGAAGCTCTGGTAACACAGAGTGGAGGACCGAACCGGTTGACGTTGAAAAGT 341 Query 121 TAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTC 180 |||||| ||||||||||||||||||||| || |||||| ||| |||||| || ||| Sbjct 342 CTTCGGATGACCTGTGGGTAGGGGTGAAAGGCCAATCAAACTGGGAGATAGCTCGTACTC 401 Query 181 TCCGAAAACTATTTAGGTAGTGCCTCAAGTATCACC-ATCGGG-GGTAGAGC-ACTGTTA 237 |||||| |||||||| || | |||| | || | |||||||| |||| | Sbjct 402 CCCGAAATGCATTTAGGTGCAGCGTTGCGTATAAGTTATATAGAGGTAGAGCTACTGAT- 460 Query 238 TGGCTAGGGGGTCATTGCGACTTACCAAACCATTGCAAACTCCGAATGCGCATCAGTTTT 297 ||| | |||| | | | | |||||| | | |||||||||||||| || | | || Sbjct 461 TGGATGCGGGGGCTTCACCGCCTACCAATTCCTGACAAACTCCGAATGCTAATAAATGTT 520 Query 298 ACCGCGGGAGTGAGGGCATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGACT 357 | | ||||||||||||||||||||||||| || |||||||| ||||| || ||| Sbjct 521 GAT-CAGCAGTGAGGGCATGGGTGCTAAGGTCCATGTCCGAGAGGGAAAGAACCCAGACC 579 Query 358 ATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTGATTGCTAAGACA 417 | ||||||||| ||| |||| |||||||| || |||| || || ||| |||| Sbjct 580 AACAGCTAAGGTCCCCAAATATATGCTAAGTTGAAACAACGCGGTTGGACTGCATTGACA 639 Query 418 GCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACTAGTC 477 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 640 GCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACTAGTC 699 Query 478 GAGGAGTCGGGCGTGGATAATAATCGGGTATTAAGTTGTCTACCGAAGC 526 ||| ||| || ||||||||||||||| | |||| ||||||||| Sbjct 700 GAGCGGTCCAGCATGGATAATAATCGGGCA-TAAGCATATTACCGAAGC 747 >seq8079 Length=1626 Score = 273 bits (302), Expect = 7e-71 Identities = 358/482 (74%), Gaps = 14/482 (3%) Strand=Plus/Minus Query 2 CGAGTCCGAACAGGGCGACAGTCGCTGG-GTGT-AGACCCGAAACCAAGTGATCTACCCA 59 |||||| |||||||||||||| ||| || | |||||||||||| | |||||| || Sbjct 1217 CGAGTCTGAACAGGGCGACAGAGTATGGTGTATTAGACCCGAAACCCGGCGATCTAGGCA 1158 Query 60 TGGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAA 119 || ||||| ||||||||||||||||||| ||||||| ||||||| |||||||||||| Sbjct 1157 TGACCAGGTTGAAGGTGCGGTAACACGCACTGGAGGACCGAACCGGTGAATGTTGAAAAA 1098 Query 120 TTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCT 179 || ||||||| |||| |||||||||||||| || ||| | |||||||||||||||| Sbjct 1097 TTCTCGGATGAGTTGTGTTTAGGGGTGAAAGGCCAATCAAGCCGGGAAATAGCTGGTTCT 1038 Query 180 CTCCGAAAACTATTTAGGTAGTGCCTC--AAGTATCACCATCGGGGGTAGAGCACTGTTA 237 | ||||| ||||| |||||| || || | |||| || | ||||||||||||||| | Sbjct 1037 CCGCGAAATCTATTGAGGTAGAGCGTCGAATGTAT-GCCGTTGGGGGTAGAGCACTG-GA 980 Query 238 TGGCT-AGGGGGTCATTGCGACTTACCAAACCATTGCAAACTCCGAATGCGCATCAGT-T 295 ||| | ||||||| | || |||||| | |||||||||||| | | ||| | Sbjct 979 TGGTTGCGGGGGTC-GCGAGATCTACCAATACTAACCAAACTCCGAATACCAACGAGTCT 921 Query 296 TTACCGCGGGAGTGAGGGCATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGA 355 | || || || ||| |||||||||||||||| | | ||| || | || | Sbjct 920 TGTTCGGCAGACAGACGGC--GGGTGCTAAGGTCCGTCGTCAAAAGGGAAACAGCCCTAA 863 Query 356 CTATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTGATTGCTAAGA 415 | ||||||||| ||| || | | |||||| | || | || || | | || | Sbjct 862 CCTACAGCTAAGGTCCCCAAGTCATCACTAAGTGGGA--AAGCATGTGGGAATCCCAAAA 805 Query 416 CAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACTAG 475 || | |||| |||||||| |||||||||| || |||||||| ||||||||||||||| | Sbjct 804 CAACCAGGAGGTTGGCTTAGAAGCAGCCA-TCCTTTAAAGAAAGCGTAACAGCTCACTGG 746 Query 476 TC 477 || Sbjct 745 TC 744 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1689425143296