Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinus_20polychrous_20[genbank_20GCA_5F000787475.1_202014-11-26] 10,349 sequences; 38,054,542 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq9096 389 1e-105 seq8079 156 1e-35 >seq9096 Length=1966 Score = 389 bits (430), Expect = 1e-105 Identities = 431/564 (76%), Gaps = 27/564 (5%) Strand=Plus/Minus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60 ||||| |||| ||||| ||||||||||||||| ||| || ||||| | | | || || Sbjct 1872 TCGACCTGTATGTCTCTCAGTCAAGCTCCCTTATGCCATTGCACTCTACGCACGGTTACC 1813 Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120 || | ||||||||||||||| | ||||||||||| ||| ||||| | ||| |||||| Sbjct 1812 AAGCGTGCTGAGGGAACCTTTAGAAGCCTCCGTTACTCTTTTGGAGG-CGACCACCCCAG 1754 Query 121 TTAAACTACCCACCAGGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGATATCCAC 180 | ||||||||||||| ||| ||||||| ||| | || |||||| || Sbjct 1753 TCAAACTACCCACCAAGCAATGTCCCCC-----GAT--TCGG----GGTTAGGCCTCAGA 1705 Query 181 TACGGTCAGAGTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCATAGT 240 | | || ||||||||||||||| ||||||||||| |||||| ||| | ||| ||| Sbjct 1704 CAAGCAAAGGGTGGTATTTCAACAATGACTCCACAACGCCTAGCGACGCCACTTCACAGT 1645 Query 241 CTCCCACCTATCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGTCC- 299 ||||||||||||||||||| || | || | |||||| |||||||||| ||||| | Sbjct 1644 CTCCCACCTATCCTACACATCACGTGTCCAAGGTCAATACTAAGCTATAGTAAAGGTTCA 1585 Query 300 CGGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCACCG 359 | |||||||||||||| ||| | || ||||||| || |||| ||||||||||| Sbjct 1584 CAGGGTCTTTTCGTCCCATTGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACCG 1525 Query 360 GGCCTGTGGTTGAGACAGCAGGGGAG-TCGTTACGCCATTCGTGCAGGTCGGAACTTACC 418 || |||| |||||||| | || ||||||| ||||||||||||||||||||||||| Sbjct 1524 AGCTCGTGGCTGAGACAGT-GCCCAGATCGTTACACCATTCGTGCAGGTCGGAACTTACC 1466 Query 419 CGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTT 478 |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| Sbjct 1465 CGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTT 1406 Query 479 CAATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCT--CTTAACCTTCCAGCA 536 || | | |||| | | || | || | | ||| ||||||||||||||| Sbjct 1405 CAGTCA-ATGCCT-TCGAATTAC------TTCTAAGCA--CCTTCCTTAACCTTCCAGCA 1356 Query 537 CCGGGCAGGCGTCAGTCCGTATAC 560 ||||||||| ||||| || ||||| Sbjct 1355 CCGGGCAGGTGTCAGACCCTATAC 1332 >seq8079 Length=1626 Score = 156 bits (172), Expect = 1e-35 Identities = 134/169 (79%), Gaps = 19/169 (11%) Strand=Plus/Plus Query 396 ATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTT 455 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 1 ATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTT 60 Query 456 ACCACCGCCGTTTACTGGGGCTTCAATTACCCGCCTCACACACCACGTGGTGTGCTCACG 515 || ||||||||||| |||||||||||| || | || ||| Sbjct 61 ACGGCCGCCGTTTACCGGGGCTTCAATT-----------------CGGAGCTTG--CACT 101 Query 516 AGTCCTCTTAACCTTCCAGCACCGGGCAGGCGTCAGTCCGTATACCTCG 564 ||||||||||||||| |||||||||||||||||| || ||||| ||| Sbjct 102 CCTCCTCTTAACCTTCCGGCACCGGGCAGGCGTCAGACCCTATACGTCG 150 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1702223818624