Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinus_20polychrous_20[genbank_20GCA_5F000787475.1_202014-11-26] 10,349 sequences; 38,054,542 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq167 143 4e-32 seq9138 134 2e-29 >seq167 Length=9215 Score = 143 bits (158), Expect = 4e-32 Identities = 211/285 (74%), Gaps = 14/285 (5%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| | |||||| || ||||| |||||| ||||| || | |||| | Sbjct 1089 GTACGAGAGGAACCGTTCA-TTCAGA-TATTTGGTATTTGCGCCTGTCCGATCGGGCAAT 1146 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | |||||||||| |||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct 1147 GGCGCGAAGCTATCATCTGCTGGATTATGGCTGAACGCCTCTAAGCCAGAATCCGTGCCA 1206 Query 121 GAACGGGGTGAT-TCTCTCCTGCACATCGTAGTCGGATACGAATAG-GCTTCGGCCCCGA 178 ||| | |||| | ||| |||||| ||| | | ||||| |||| | | || Sbjct 1207 GAA-ACGATGATGTTGGTCCCGCACATATAAGTTGTGTTAAAATAGAGCTTTGCTCGTGA 1265 Query 179 ACCTTAGCAGGCCGGCAACGGGC--GTCCCGCGGAA--GCGCGGGGCGCTCAGCTGGCGG 234 ||| | |||| ||| |||| || |||||| || ||| ||| | ||| Sbjct 1266 ACCAAATCAGGTGGGC--TGGGCTGCTCAGGCGGAAATGCCTGGGTGGCT-TGTCCGCGA 1322 Query 235 ATTGCAAT-TTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 |||| ||| ||| ||| || ||| | ||||||||||||||||| Sbjct 1323 ATTGAAATAATCA-TATGGGCGGGGGTGAATCCTTTGCAGACGAC 1366 >seq9138 Length=632 Score = 134 bits (148), Expect = 2e-29 Identities = 111/133 (83%), Gaps = 2/133 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || ||| | ||||||||| ||||||| | |||| || ||| Sbjct 50 GTACGAGAGGAACCGTTGA-TTC-GCATAATTGGTATTTGCGGTTAGCTGAAAAGCTAGT 107 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 |||||||||||||||| | |||||| ||||||||||||||||||| |||||||||| | Sbjct 108 GCCGCGAAGCTACCATGCGTCGGATTACGGCTGAACGCCTCTAAGTCGGAATCCATGCTA 167 Query 121 GAACGGGGTGATT 133 ||||| | ||||| Sbjct 168 GAACGCGATGATT 180 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819117870336