Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lepista_20sordida_20[genbank_20GCA_5F900168675.1_202017-06-15] 11,645 sequences; 56,651,772 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq168 185 7e-42 seq5512 120 2e-22 >seq168 Length=158170 Score = 185 bits (204), Expect = 7e-42 Identities = 376/556 (68%), Gaps = 7/556 (1%) Strand=Plus/Minus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||| |||||||| ||||| || || || |||||||| | ||||||| | || | Sbjct 53546 ATCTGGCAAATGTACAAGAAGGCTGAGGCGTCTTTCTGGACTGCGGAGGAGATGGACCTC 53487 Query 61147 TCCAAAGACATGAATGACTGGG---AGCGTTTATCGAGCGGTGAACAACATTTCATTAAA 61203 |||||||| || | |||||| | ||| || | || | |||||||| Sbjct 53486 TCCAAAGATATCCACGACTGGACCAACCGTCTAAATGACAACGAGCGTCATTTCATCTCG 53427 Query 61204 CATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGT 61263 || || | || ||||| || || || || ||||| ||||| ||||| | |||| | Sbjct 53426 CACGTTCTTGCTTTCTTCGCTGCCTCTGATGGTATTGTCAACGAGAACCTTCTGGAGAGG 53367 Query 61264 TTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATG 61323 || | | || || ||||| | |||||||| |||||||| |||||||| || ||| Sbjct 53366 TTTTCAAATGAAGTCCAAGTTGCCGAGGCGCGCTGTTTCTATGGCTTCCAAATCATGATG 53307 Query 61324 GAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCG 61383 ||||| |||| || || || |||||||||| || || |||| ||| | Sbjct 53306 GAGAACATCCATTCCGAAGCCTATTCGCTTCTCATCGACACTTATATCAAGGATGCTACT 53247 Query 61384 GAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGAT 61443 | |||||| | || |||||||||||||||| || | ||||| || || || Sbjct 53246 CAGCGTGAATATCTCTTTGATGCCATCGAGACGATTCCTTGCATCAAGCGCAAGGCAGAA 53187 Query 61444 TGGGCCTTCAATTGGATCACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTT 61503 |||||| | | ||||| | || | | |||||||| ||||| | | || || Sbjct 53186 TGGGCCCTTGAGTGGATTTCAGATAAGAAATCAACATTTGGCGAACGCCTCGTTGCGTTC 53127 Query 61504 GCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAA 61563 || | || |||||| | || ||| |||||||||||| ||||||| ||| ||||||| Sbjct 53126 GCTGCTGTAGAGGGTATTTTCTTCTCTGGATCGTTTGCGTCAATCTTCTGGATGAAGAAG 53067 Query 61564 CGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCA--CGCGACGAGGGCA 61621 ||||| | ||||| || || || || ||| || | ||||| || || || |||| Sbjct 53066 CGTGGCTTGATGCCTGGACTTACTTTTTCCAACGAACT--TATCAGTCGTGATGAAGGCA 53009 Query 61622 TGCATTGTGATTTTGC 61637 |||| |||||||| Sbjct 53008 TGCACACCGATTTTGC 52993 Score = 104 bits (114), Expect = 2e-17 Identities = 132/182 (73%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 61738 GACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAA 61797 ||||| | || ||| ||||||||||||||||| || | |||| ||||| || || Sbjct 52841 GACGCACTTCCTGTCAAACTCATCGGCATGAATTCTGACTTGATGTGCCAGTACATCGAG 52782 Query 61798 TTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAAAAC 61857 || ||||||||||| || | |||| | |||| | | | | || ||| ||| || Sbjct 52781 TTCGTTGCCGACCGACTACTTGTCGCTCTGGGCAACGACAAGGTGTACAATTCGACGAAT 52722 Query 61858 CCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGT 61917 || || || ||||||||||||||||| || | || || |||||||| || || || ||| Sbjct 52721 CCCTTCGACTTCATGGACATGATTTCACTCCAGGGGAAAACGAATTTCTTTGAAAAGCGT 52662 Query 61918 GT 61919 || Sbjct 52661 GT 52660 >seq5512 Length=8717 Score = 120 bits (132), Expect = 2e-22 Identities = 161/224 (72%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 66344 AATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCG 66403 || || ||||| ||||| | |||||||||||||| | || || ||| || |||| Sbjct 5779 AAAAGGTCAGGGATCCACAAAGCGTAGAAGAGATCCCTGGCACGAGACTCTTCCTTGCCA 5720 Query 66404 TGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATG 66463 ||||| || |||| ||||||||| |||| | || |||||||| ||||| | ||||||| Sbjct 5719 TGATTCTTTCGCAGGTCGAGGAAATCAAGAACATCAGCATGCCAAGGTTCGATGTAGATG 5660 Query 66464 GCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAG 66523 ||||||| || || || ||| || ||||| ||||| ||||| | | | | Sbjct 5659 GCGAACGCTCCAGGCCGCTTATTGCCTCCCTGGTCAACGTAACGAGCAGTAGCATCGTAC 5600 Query 66524 ACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCC 66567 | |||| |||||| || | ||||| || | ||||||||| || Sbjct 5599 GCGCGCAGCATCGGCACAATACCGTTGGAATAGCCATTGGTTCC 5556 Score = 96.9 bits (106), Expect = 3e-15 Identities = 215/323 (67%), Gaps = 0/323 (0%) Strand=Plus/Minus Query 66599 TGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAATCGGCCACTGTC 66658 |||| ||| ||||||||||| ||||| || || ||| ||||||| || || Sbjct 5471 TGAATATTAAGACCAATACCTCCGGCGGTTTTACTGATCATGGCACAATTCTTCAACGTA 5412 Query 66659 CGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGG 66718 | | ||||| ||||| || ||| |||| || | |||| |||| || || ||||| Sbjct 5411 TCGTAGATGCCCTCAATTGAATCATCCTTCATACAAACGAGGAAGCAAGAGCTGAGTTGA 5352 Query 66719 GGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGAC 66778 || | || ||| | || |||||| ||||||| || || || ||||| | |||| Sbjct 5351 GGACTAGGCGTGCCTGCGTTGAAGAGAGTGGGTGATGCATGGGTGAAGTATCGTTCAGAC 5292 Query 66779 ATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTGCACAT 66838 ||| || || |||| || ||| || |||| |||||| ||||||| ||| Sbjct 5291 ATGAGGTTATAAGTCTGAATAACACGGTCGATGTCCGAGCCATGGATCCCGACAGCAACA 5232 Query 66839 CGCATCAGGAGGTATTGAGGCCGTTCGACCAGCCGATCCTTGATATGCATTAAGTAGGAG 66898 ||||| | | || || || || || | | || | | ||| | | | ||| ||| Sbjct 5231 CGCATTATCATGTGCTGTGGACGCTCAGCGACACGCCCGTCGATGCGGAGAAGGTATGAG 5172 Query 66899 CGTTCCAGGGTCTTGATACCAAA 66921 ||||| |||||||||| ||||| Sbjct 5171 CGTTCAAGGGTCTTGAAGCCAAA 5149 Score = 89.7 bits (98), Expect = 4e-13 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 65807 AAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGATGACGCAAATTGGAACGT 65866 ||||||||||| |||||||| || |||| ||||||||| || ||||||| || || || Sbjct 6396 AAAGTGTCGGCGAGACCTTGTACACCAACACCGATGGGGCGGTGACGCATGTTCGATCGG 6337 Query 65867 CTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAATGCGATT 65910 | || || || | |||||| || |||| ||||| |||||||| Sbjct 6336 CGAGCTTCGGGGATAGGGTAATAGTTGACGTCGATGATGCGATT 6293 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397511575782800