Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lepista_20sordida_20[genbank_20GCA_5F900168675.1_202017-06-15] 11,645 sequences; 56,651,772 total letters Query= NC_031927.1 Length=216121 Score E Sequences producing significant alignments: (Bits) Value seq1314 87.8 2e-12 >seq1314 Length=22516 Score = 87.8 bits (96), Expect = 2e-12 Identities = 219/333 (66%), Gaps = 0/333 (0%) Strand=Plus/Plus Query 162343 CACGTTAAGGTTTCATTTGATCAGCCTGAATACACAGCACAGACCGACGCATTGGGCACT 162402 ||||| || ||||| || || | | |||||||| | | | |||| | || ||| Sbjct 11138 CACGTCAAAGTTTCTTTCGAAATGGCCGAATACACCGGAGACGTTGACGGCCTTGGTACT 11197 Query 162403 CTAAGGGTGCTAGAAGCCGTCCGTCTTCTTGGTATGGAATCATACGTAAGAATCTACCAA 162462 ||| | | || || |||||||| | ||| |||| |||| | |||| || Sbjct 11198 CTACGCCTCCTTGATGCCGTCCGCACTTGTGGCTTGGAGAAGCACGTCAAGTTCTATCAG 11257 Query 162463 GCGAGCACCAGTGAGCTTTATGGGCTAGTTCAGGAGACACCCCAGAAAGAAACCACTCCA 162522 ||| || ||||| ||||| || |||||| ||||||| ||||| || ||| Sbjct 11258 GCGTCGACATCGGAGCTGTATGGCAAGGTGGTGGAGACCCCCCAGAGCGAAACGACACCA 11317 Query 162523 ATGTATCCACGATCCCCTTATGGAGTTGCTAAACTATATGGGTTCTGGATCATCAAAAAC 162582 | ||||| |||||||||||||| ||| || || || | || ||||||| || ||| Sbjct 11318 TTCTATCCCCGATCCCCTTATGGCTGTGCAAAGCTCTACGCGTACTGGATCGTCGTCAAC 11377 Query 162583 TACAGGGAAAGCTATGACATACATGCCTCTAGCGGTATTCTATTCAATCACGAAAGCTCA 162642 ||| | || || | || || | | ||||| || ||||||||||| || | Sbjct 11378 TACCGTGAGGCATACGGAATGTTCGCGTGCAATGGTATCCTGTTCAATCACGAGAGTCCT 11437 Query 162643 CGCAGAGGAGAGACGTTCGTCACACGCAAGATC 162675 || | ||| ||| ||||| || || |||||| Sbjct 11438 CGTCGCGGAAGGACATTCGTGACGCGAAAGATC 11470 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 691358549470200