Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leucoagaricus_20sp._20SymC.cos_20[genbank_20GCA_5F001563735.1_202016 -02-25] 20,457 sequences; 119,028,496 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq400 313 5e-83 seq903 311 2e-82 seq478 280 3e-73 seq941 235 1e-59 seq16834 228 1e-57 seq9703 102 1e-19 >seq400 Length=118247 Score = 313 bits (346), Expect = 5e-83 Identities = 257/309 (83%), Gaps = 3/309 (1%) Strand=Plus/Minus Query 12 GCCGGGCCTTTCCTTCTGGGGATCC-GCATGCCCTTCACTGG-GTGTGCCGGGGAGCCAG 69 || ||||||| | | ||| || || ||||||||| | ||| || || | |||| |||| Sbjct 18329 GCTGGGCCTTACTTCTTGGTGAGCCAGCATGCCCTCTATTGGTGTTTGTCAGGGAACCAG 18270 Query 70 GACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCA 129 ||||||||| |||| |||||||||||||||||||||| ||| ||| ||||| ||||||| Sbjct 18269 GACTTTTACCTTGAGAAAATTAGAGTGTTCAAAGCAGACCTATGCCTGAATATATTAGCA 18210 Query 130 TGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGA 189 |||||||||| |||||||||||| |||||||||||||||||||||| ||| ||||||| Sbjct 18209 TGGAATAATAAAATAGGACGTGCAGTTCTATTTTGTTGGTTTCTAGAGTCGCTGTAATGA 18150 Query 190 TTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTA 249 |||||||||||||| ||||| | ||||| | | |||||||||||||||||||| | Sbjct 18149 TTAATAGGGATAGTTGGGGGCATTGGTATTGAGTCACTAGAGGTGAAATTCTTGGATTGA 18090 Query 250 TTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAA 309 | |||||| |||||||||||||| || |||||||| ||||||||||||| ||| ||| Sbjct 18089 CTCAAGACTGACTACTGCGAAAGCATTTGCCAAGGATATTTTCATTAATCA-AGAATGAA 18031 Query 310 AGTTAGGGG 318 |||||||| Sbjct 18030 GGTTAGGGG 18022 >seq903 Length=88289 Score = 311 bits (344), Expect = 2e-82 Identities = 258/310 (83%), Gaps = 5/310 (2%) Strand=Plus/Minus Query 12 GCCGGGCCTTTCCTTCTGGGGATCC-GCATGCCCTTCACTGGGTGTGC--CGGGGAGCCA 68 || ||||||| | | ||| || || |||||||||| | ||| ||||| | |||| ||| Sbjct 64705 GCTGGGCCTTACTTCTTGGTGAGCCAGCATGCCCTTTATTGG-TGTGCATCAGGGAACCA 64647 Query 69 GGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGC 128 |||||||||| |||| |||||||||||||||||||||||||| ||| ||||||||||| Sbjct 64646 GGACTTTTACCTTGAGAAAATTAGAGTGTTCAAAGCAGGCCTATGCCTAAATACATTAGC 64587 Query 129 ATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATG 188 ||||||||||| |||||||| || |||||||||||||||||||||| | | |||||| Sbjct 64586 ATGGAATAATAAAATAGGACATGTGGTTCTATTTTGTTGGTTTCTAAAGTCACTGTAATG 64527 Query 189 ATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTT 248 |||||||| |||||| ||||| | ||||| | ||| ||||||||||||||| |||| Sbjct 64526 ATTAATAGAGATAGTTGGGGGCATTGGTATTGAGTTGCTAGAGGTGAAATTCTTAGATTG 64467 Query 249 ATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGA 308 | | ||||| ||||||||||||||| || |||||||||||||||||||||| ||| || Sbjct 64466 ACTCAAGACCAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAATGA 64408 Query 309 AAGTTAGGGG 318 | |||||||| Sbjct 64407 AGGTTAGGGG 64398 Score = 152 bits (168), Expect = 9e-35 Identities = 172/230 (75%), Gaps = 18/230 (8%) Strand=Plus/Minus Query 87 AATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCATGGAATAATAGAATAGG 146 ||| |||||||||||||||||||| ||| | |||||||||||||||||||||| |||||| Sbjct 42011 AATCAGAGTGTTCAAAGCAGGCCTATGCCCAAATACATTAGCATGGAATAATAAAATAGG 41952 Query 147 ACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGG 206 || || |||| ||| | || ||| || || | ||||||| || Sbjct 41951 ACATGGGGTTTTAT-------GAATCAAGG------GTCATAGGCA----GGATAGTTGG 41909 Query 207 GGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTG 266 ||| | ||||| | | |||| ||||||||||||||| | | |||||| |||||| Sbjct 41908 GGGCATTGGTATTGAGTCACTAGAGATGAAATTCTTGGATTGACTCAAGACTGGCTACTG 41849 Query 267 CGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGG 316 |||||| || |||||||||||||||||||||| ||| ||| |||||| Sbjct 41848 TGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAATGAAGGTTAGG 41800 >seq478 Length=95821 Score = 280 bits (310), Expect = 3e-73 Identities = 251/310 (81%), Gaps = 5/310 (2%) Strand=Plus/Plus Query 12 GCCGGGCCTTTCCTTCTGGGGATCCG-CATGCCCTTCACTGGGTGTGC--CGGGGAGCCA 68 || ||||||| | | ||| || | | ||||||||| | ||| | ||| | |||| ||| Sbjct 50070 GCTGGGCCTTACTTCTTGGTGAGCTGGCATGCCCTTTATTGG-TATGCATCAGGGAACCA 50128 Query 69 GGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGC 128 |||||||||| |||| |||||||||||||||||||||||||| ||| ||||| |||||| Sbjct 50129 GGACTTTTACCTTGAGAAAATTAGAGTGTTCAAAGCAGGCCTATGCCTGAATATATTAGC 50188 Query 129 ATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATG 188 || |||||||| ||||||| ||| |||||||||||||||||||||| | || |||| Sbjct 50189 ATAGAATAATAAAATAGGATATGCAGTTCTATTTTGTTGGTTTCTAGAGTCACCATAATA 50248 Query 189 ATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTT 248 ||||||||||||||| ||||| | ||||| | | |||||||||||||||||||| Sbjct 50249 ATTAATAGGGATAGTTGGGGGCATTGGTATTGAGTCACTAGAGGTGAAATTCTTGGATTG 50308 Query 249 ATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGA 308 | | ||||| |||||||| ||||| || ||||||||| |||||||||||| ||| || Sbjct 50309 ACTCAAGACCGACTACTGCAAAAGCATTTGCCAAGGATGGTTTCATTAATCA-AGAATGA 50367 Query 309 AAGTTAGGGG 318 | |||||||| Sbjct 50368 AGGTTAGGGG 50377 >seq941 Length=80906 Score = 235 bits (260), Expect = 1e-59 Identities = 177/208 (85%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 93 AGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCATGGAATAATAGAATAGGACGTGC 152 |||||||||||||||||| ||| ||||| |||||||||||||||||| ||||||| ||| Sbjct 1628 AGTGTTCAAAGCAGGCCTATGCCCGAATCCATTAGCATGGAATAATAAAATAGGATATGC 1687 Query 153 GGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGT 212 ||||||||||||| |||||||| | | ||||||||||||||||||||| ||||| | Sbjct 1688 AGTTCTATTTTGTTAGTTTCTAGAGTCACTGTAATGATTAATAGGGATAGTTGGGGGCAT 1747 Query 213 CAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAG 272 ||||| | | | |||||||||||||||||||| | | ||||| ||||||||||||| Sbjct 1748 TGGTATTGAGTCGCTAGAGGTGAAATTCTTGGATTGACTCAAGACCGACTACTGCGAAAG 1807 Query 273 CGTTCACCAAGGATGTTTTCATTAATCA 300 | || |||||||||||||||||||||| Sbjct 1808 CATTTGCCAAGGATGTTTTCATTAATCA 1835 >seq16834 Length=427 Score = 228 bits (252), Expect = 1e-57 Identities = 198/242 (82%), Gaps = 3/242 (1%) Strand=Plus/Minus Query 72 CTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCAT 130 || |||||||||| ||||||||||| |||||||| |||| |||| | |||||||||||| Sbjct 240 CTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGTATACATTAGCAT 181 Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGAT 190 || |||| | |||||| | |||| ||||| ||||| | ||| || |||||||| Sbjct 180 GGGATAACATTATAGGATTT-CGGTCCTATTACGTTGGCCTTCGGGATCGGAGTAATGAT 122 Query 191 TAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTAT 250 ||| ||||| ||||||||| | ||||| || |||||||||||||||||||||||||| Sbjct 121 TAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTAT 62 Query 251 TGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAA 310 ||||| ||| ||||||||||| || |||||||||||||||||||||| |||||||| Sbjct 61 GAAAGACGAACAACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGAAA 3 Query 311 GT 312 || Sbjct 2 GT 1 >seq9703 Length=227 Score = 102 bits (112), Expect = 1e-19 Identities = 87/105 (83%), Gaps = 2/105 (2%) Strand=Plus/Plus Query 7 GTCCGGCCGGGCCTTTCCTTCTGGGGATCCG-CATGCCCTTCACTGG-GTGTGCCGGGGA 64 || |||| ||||||| | | ||| || ||| | ||||||| | ||| ||| | |||||| Sbjct 123 GTTCGGCTGGGCCTTACTTCTTGGTGAGCCGGCGTGCCCTTTATTGGTGTGCGTCGGGGA 182 Query 65 GCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCC 109 ||||||||||||| |||| ||||||||||||||||||||||||| Sbjct 183 ACCAGGACTTTTACCTTGAGAAAATTAGAGTGTTCAAAGCAGGCC 227 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915012777536