Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leucoagaricus_20sp._20SymC.cos_20[genbank_20GCA_5F001563735.1_202016 -02-25] 20,457 sequences; 119,028,496 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq478 302 7e-80 seq903 226 5e-57 seq17147 89.7 8e-16 seq400 82.4 1e-13 >seq478 Length=95821 Score = 302 bits (334), Expect = 7e-80 Identities = 221/257 (86%), Gaps = 0/257 (0%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 |||| |||||| ||||||||||| | | ||| ||||||||||||||||||||||||||| Sbjct 61190 ACTCACTGGCTCTGTCAGTGTAGCACACATGCAGCCCAGAACATCTAAGGGCATCACAGA 61131 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 |||||||||||||||||||||||| ||| || | | ||||||||||||||||| | Sbjct 61130 CCTGTTATTGCCTCAAACTTCCATCAGCTAGACACTGACAGTCCCTCTAAGAAGCCTGTG 61071 Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181 |||| | | || | | |||||||||||||||||||||| || ||||||||||||| Sbjct 61070 ACCAGCAAAAGCTGGCCTGACTATTTAGCAGGTTAAGGTCTCATTTATTATCGGAATTAA 61011 Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241 ||||||||||||||| |||||||||||| |||||||||||||||||||| ||||| ||| Sbjct 61010 CCAGACAAATCACTCTACCAACTAAGAATAGCCATGCACCACCACCCATAAAATCATGAA 60951 Query 242 AGAGCTATCAATCTGTC 258 ||||||||||||||||| Sbjct 60950 AGAGCTATCAATCTGTC 60934 >seq903 Length=88289 Score = 226 bits (250), Expect = 5e-57 Identities = 170/200 (85%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 59 AGACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCA 118 |||||||||||||||||||||||| || ||| || || | |||||||||||||||| Sbjct 40916 AGACCTGTTATTGCCTCAAACTTCTATCAGCTAGATGCTGACAGTCCCTCTAAGAAGCTG 40975 Query 119 GCCACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAAT 178 || |||| | | || | | |||||||||||||||||||| |||| |||| ||||| Sbjct 40976 GCAACCAGCAAAAGCCAGCCTAGTTATTTAGCAGGTTAAGGTCTTGTTCATTATTGGAAT 41035 Query 179 TAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAA 238 |||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| Sbjct 41036 TAACCAGACAAATCACTCCACCAACTAAGAACAGCCATGCACCACCACCCATAAAATCAT 41095 Query 239 GAAAGAGCTATCAATCTGTC 258 ||||||| ||||||||| || Sbjct 41096 GAAAGAGTTATCAATCTATC 41115 Score = 170 bits (188), Expect = 3e-40 Identities = 109/119 (92%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 140 GGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCAC 199 |||||||||||||||||||||||| || ||||| ||||||||||||||||||||||| || Sbjct 55694 GGCTATTTAGCAGGTTAAGGTCTCATTTGTTATTGGAATTAACCAGACAAATCACTCTAC 55753 Query 200 CAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||| ||| ||||||||| |||||||||| ||||| ||||||||||||||||||| Sbjct 55754 CAACTAAAAACAGCCATGCACTACCACCCATAAAATCATAAAAGAGCTATCAATCTGTC 55812 >seq17147 Length=453 Score = 89.7 bits (98), Expect = 8e-16 Identities = 57/62 (92%), Gaps = 0/62 (0%) Strand=Plus/Minus Query 3 CTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGAC 62 |||| || | | ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 62 CTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGAC 3 Query 63 CT 64 || Sbjct 2 CT 1 >seq400 Length=118247 Score = 82.4 bits (90), Expect = 1e-13 Identities = 57/65 (88%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 |||| |||||| |||||||||| | || ||| ||| ||||||||||||||||||||||| Sbjct 36672 ACTCACTGGCTCTGTCAGTGTAGTGTGCATGCAGCCTAGAACATCTAAGGGCATCACAGA 36731 Query 62 CCTGT 66 ||||| Sbjct 36732 CCTGT 36736 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796642092417