Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leucosporidium_20creatinivorum_20[genbank_20GCA_5F001600635.1_202016 -03-01] 122 sequences; 27,969,159 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq21 241 1e-58 seq20 109 4e-19 >seq21 Length=517387 Score = 241 bits (266), Expect = 1e-58 Identities = 426/615 (69%), Gaps = 6/615 (1%) Strand=Plus/Plus Query 66313 CCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAA 66372 ||| || || ||| || ||||| ||| || || || || |||||||||||| |||| Sbjct 16606 CCAGTCGCCGGCCTCCTCGACACGCTCCATGAAGAGGTCGGGAATCCAGAGGGCGAAGAA 16665 Query 66373 GAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAA 66432 |||||| | || || |||||| ||||||| || ||||| | |||||||||||| || Sbjct 16666 GAGATCCCTGGCGCGAACCTCCTCCTTGCCGTGGTTCTTGCGAAGGTCGAGGAACTCGAA 16725 Query 66433 GATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACC 66492 ||||||||| ||||||||||| |||||||||||||| | || || ||| || || Sbjct 16726 GATGTCGGCGTGCCATGGTTCGAGGTAGATGGCGAAGGCTCCGGGGCGCTTGTTTCCTCC 16785 Query 66493 TTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGA 66552 ||||| ||||||||||| |||||| ||||||| | ||| || | || ||||| || Sbjct 16786 CTGGTCAACGTAGCGAGCCGTGTTGTTGTAGACACGGAGCATAGGGATGATGCCGTTCGA 16845 Query 66553 TTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACC 66612 | ||| ||||| ||| ||||| || || || || || | ||| | | || || Sbjct 16846 GTAGCCGTTGGTTCCGGCGATGTACGAGCCAGTCGCGCGGATGTTGTGGATGCTGAGTCC 16905 Query 66613 AATACCACCGGCCGTCTTCGAGATGGCAGCACA-ATC-GGCCACTGTCCGGAATATGCCG 66670 || || ||||||||||| |||||| || || || | |||| | | || || Sbjct 16906 GATTCCTCCGGCCGTCTTGGAGATGAGGGCGCAGGTCTTGAGCGTGTC--GTAGATACCC 16963 Query 66671 TCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTG 66730 || || ||||| |||| ||||| | |||| |||| || || ||||| | || || Sbjct 16964 TCGATCGAGTCGTCCTTCATGGTGACGAGGAAGCAGGAGGAGAGCTGGGGGTGAGGAGTT 17023 Query 66731 GCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTAC 66790 |||| ||||||||| || | ||||| || ||||| | |||||| |||||| Sbjct 17024 CCGGCGTTGAAGAGGGTCGGCGAGGCGTGGGTGAAGTAGCGCTCCGACATGAGGTTGTAC 17083 Query 66791 GTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTGC-ACATCGCATCAGGAG 66849 | || || || ||||||| ||| || || |||| || ||| ||||| || | Sbjct 17084 GACTGGAGAACGCGCTCAATGTCCGAGCCGTGGATACCGACAGCGACA-CGCATGAGCAT 17142 Query 66850 GTATTGAGGCCGTTCGACCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGT 66909 || ||||| || ||| | | | | | ||| | | | ||| ||||| || ||||| Sbjct 17143 GTGCTGAGGTCGCTCGGCGACCTTGCCGTCGATGCGAAGGAGGTAAGAGCGCTCGAGGGT 17202 Query 66910 CTTGATACCAAAGTA 66924 ||||| || ||||| Sbjct 17203 CTTGAAGCCGAAGTA 17217 >seq20 Length=589438 Score = 109 bits (120), Expect = 4e-19 Identities = 166/231 (72%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 61091 GGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCA 61150 |||||| |||||| ||||| || || ||||||||||| | || ||| | || | |||| Sbjct 425894 GGCGCA-GTACAAGAAGGCTGAGGCCTCCTTCTGGACCGCCGAAGAGATGGACCTTTCCA 425836 Query 61151 AAGACATGAATGACTGGGAGC----GTTTATCGAGCGGTGAACAACATTTCATTAAACAT 61206 | |||||| | |||||||| | | | ||| | || | | || || | || Sbjct 425835 AGGACATGCACGACTGGGACAACAAGCTCAAGGAG-GACGAGCGCTACTTTATCCAGCAC 425777 Query 61207 GTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTC 61266 || | || ||||| ||||||||||| ||||||||||| ||||| | | || || ||| Sbjct 425776 GTCCTCGCCTTCTTCGCCGCTTCGGATGGTATCGTCAACGAGAACCTGCTCGAGCGCTTC 425717 Query 61267 GCGCAGGAGGTGCAAGTG-TCGGAGGCGCGTTGTTTCTACGGCTTCCAGAT 61316 || ||||||| |||| | ||||| ||||| |||||||| |||||||| Sbjct 425716 TCGTCCGAGGTGC-AGTGCGCCGAGGCTCGTTGCTTCTACGGATTCCAGAT 425667 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567408866080