Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limonomyces_20culmigenus_20[genbank_20GCA_5F002233555.1_202017-07- 25] 8,889 sequences; 36,136,062 total letters Query= AAMG01001962.1 Length=275 Score E Sequences producing significant alignments: (Bits) Value seq61 89.7 8e-16 >seq61 Length=67409 Score = 89.7 bits (98), Expect = 8e-16 Identities = 93/120 (78%), Gaps = 8/120 (7%) Strand=Plus/Plus Query 160 GATAGGGACCGAACTGTCTCGCGACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGC 219 |||||||||| |||| ||| || ||| | |||||| ||||||| || ||||||| ||| Sbjct 5494 GATAGGGACCATACTGACTCACGTCGTATTAAACCCAACTCGCGTACCCCTTTAATCGGC 5553 Query 220 GAACAGCCCAACCCTTGGGACCTA-CTTCAGCCCC---AGGATGAGACGAGCCGACATCG 275 |||||||| ||||||| || | ||| ||||| |||||| || ||| |||||||| Sbjct 5554 GAACAGCCGAACCCTT----CCAAGCTTTTGCCCCCGGAGGATGGGATGAGTCGACATCG 5609 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 780732763604