Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limonomyces_20culmigenus_20[genbank_20GCA_5F002233555.1_202017-07- 25] 8,889 sequences; 36,136,062 total letters Query= AAMG01002120.1 Length=347 Score E Sequences producing significant alignments: (Bits) Value seq34 75.2 2e-11 >seq34 Length=133501 Score = 75.2 bits (82), Expect = 2e-11 Identities = 152/221 (69%), Gaps = 6/221 (3%) Strand=Plus/Plus Query 50 TCACCGTGGTTGCCCTCGGCGTTGTTCAGGCCGAACAGGCGCTCCTTGATGATTCCA-TC 108 || ||||||||||||| | | | | | ||||||| ||||||||||| || || | || Sbjct 77071 TCGCCGTGGTTGCCCTGGTGGCCGGTGACACCGAACATGCGCTCCTTGA-GAATCGAGTC 77129 Query 109 GCGCTCGTTCCACAGGGCCAGGCCCAGGCACCAACGTTGCGCC--TTGTCACTGAACCCC 166 | |||||| || |||| | | ||| | ||| | ||||| || || Sbjct 77130 CTTCGTGTTCCAGAGCGCCACGGAGAAGCAG--AGGTTCTGGTGGTTGTCGGAGATGCCG 77187 Query 167 GCCAGGCCGTCCTCGCCCCAACGGTAGGCGCGGCTGCGTGCATGGTCATGGGGGAAGTAG 226 || ||||| ||||||||||| || |||||||| ||| || || || || || |||| Sbjct 77188 GCGAGGCCATCCTCGCCCCACCGATAGGCGCGAGAGCGGGCGTGCTCGTGAGGAAAGTGC 77247 Query 227 GCCCAGGCGTCGCCATCGGCGCTGTAGTCTTCGCGCACCGT 267 | ||| || || || | | || |||||| ||||| ||||| Sbjct 77248 GACCACGCATCTCCGTTGCCGGAGTAGTCCTCGCGGACCGT 77288 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1007910398880