Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Limonomyces_20culmigenus_20[genbank_20GCA_5F002233555.1_202017-07-
25] 8,889 sequences; 36,136,062 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq522 244 8e-60
seq523 239 4e-58
seq4264 190 2e-43
>seq522
Length=1154
Score = 244 bits (270), Expect = 8e-60
Identities = 384/544 (71%), Gaps = 7/544 (1%)
Strand=Plus/Plus
Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146
|| |||| |||||||| ||||| || || || |||||||| | |||||| | || ||
Sbjct 304 ATATGGCAGATGTACAAGAAGGCTGAGGCCTCGTTCTGGACTGCCGAGGAGATGGACCTG 363
Query 61147 TCCAAAGACATGAATGACTGGG---AGCGTTT-ATCGAGCGGTGAACAACATTTCATTAA 61202
||||| ||||| | |||||| | || | | ||| | || | || |||||
Sbjct 364 TCCAAGGACATCCACGACTGGAGCAACCGCCTGAACGA-CAACGAGCGTCACTTCATCTC 422
Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262
|| || | || ||||| || || |||||||| |||||||| ||||| | | |||||
Sbjct 423 GCACGTCCTTGCCTTCTTCGCTGCCTCGGACGGCATCGTCAACGAGAACCTGCTCGAACG 482
Query 61263 TTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCAT 61322
||| || |||||||| | | || ||||| || |||||||||||||||||| ||
Sbjct 483 CTTCTCGGGCGAGGTGCAGATCGCTGAAGCGCGCTGCTTCTACGGCTTCCAGATTATGAT 542
Query 61323 GGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGC 61382
|||||| ||||||| |||| ||| | |||||||| || ||||| | ||||| |||
Sbjct 543 GGAGAACATCCACTCTGAGACCTACTCGCTCCTCATCGACACATACATTAAGGAGCCGGC 602
Query 61383 GGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGA 61442
| | || || | ||| |||| |||||||| || || |||||||| || || ||
Sbjct 603 GCAGCGCGAGTTCCTCTTCGATGCGATCGAGACCATCCCCTGCGTGAAGCGCAAGGCTGA 662
Query 61443 TTGGGCCTTCAATTGGATC-ACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCAT 61501
||||| ||| |||||| || | | | ||| | || || || || | | || |
Sbjct 663 GTGGGCGCTCACGTGGATCAACGACGAGCAGAGCT-CGTTCGGCGAGCGCCTCGTTGCGT 721
Query 61502 TTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGA 61561
| || | |||||||| | || ||| || ||||| ||| | ||||| ||| | ||||
Sbjct 722 TCGCCGCCGTCGAGGGCATCTTCTTCTCGGGCTCGTTCGCCTCCATCTTCTGGCTCAAGA 781
Query 61562 AACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCA 61621
| || ||||| |||||||| || |||||| ||| ||| | || || |||||||||||||
Sbjct 782 AGCGCGGACTCATGCCCGGCCTCACCTTCTCCAACGAGCTCATCTCGCGCGACGAGGGCA 841
Query 61622 TGCA 61625
||||
Sbjct 842 TGCA 845
>seq523
Length=1154
Score = 239 bits (264), Expect = 4e-58
Identities = 383/544 (70%), Gaps = 7/544 (1%)
Strand=Plus/Plus
Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146
|| |||| |||||||| ||||| || || || |||||||| | |||||| | || ||
Sbjct 304 ATATGGCAGATGTACAAGAAGGCTGAGGCCTCGTTCTGGACTGCCGAGGAGATGGACCTG 363
Query 61147 TCCAAAGACATGAATGACTGGG---AGCGTTT-ATCGAGCGGTGAACAACATTTCATTAA 61202
||||| ||||| | |||||| | || | | ||| | || | || |||||
Sbjct 364 TCCAAGGACATCCACGACTGGAGCAACCGCCTGAACGA-CAACGAGCGTCACTTCATCTC 422
Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262
|| || | || ||||| || || |||||||| |||||||| ||||| | | |||||
Sbjct 423 GCACGTCCTCGCCTTCTTCGCTGCCTCGGACGGCATCGTCAACGAGAACCTGCTCGAACG 482
Query 61263 TTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCAT 61322
||| || |||||||| | | || ||||| || |||||||||||||||||| ||
Sbjct 483 CTTCTCGGGTGAGGTGCAGATCGCTGAAGCGCGCTGCTTCTACGGCTTCCAGATTATGAT 542
Query 61323 GGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGC 61382
|||||| ||||||| |||| ||| | |||||||| || ||||| | ||||| |||
Sbjct 543 GGAGAACATCCACTCTGAGACCTACTCGCTCCTCATCGACACATACATTAAGGAGCCGGC 602
Query 61383 GGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGA 61442
| | || || | ||| |||| |||||||| || || |||||||| || || ||
Sbjct 603 GCAGCGCGAGTTCCTCTTCGATGCGATCGAGACCATCCCCTGCGTGAAGCGCAAGGCTGA 662
Query 61443 TTGGGCCTTCAATTGGATC-ACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCAT 61501
||||| ||| |||||| || | | | ||| | || || || || | | || |
Sbjct 663 GTGGGCGCTCACGTGGATCAACGACGAGCAGAGCT-CGTTCGGCGAGCGCCTCGTTGCGT 721
Query 61502 TTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGA 61561
| || | |||||||| | || ||| || ||||| || | ||||| ||| | ||||
Sbjct 722 TCGCCGCCGTCGAGGGCATCTTCTTCTCGGGCTCGTTCGCGTCCATCTTCTGGCTCAAGA 781
Query 61562 AACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCA 61621
| || ||||| |||||||| || |||||| ||| ||| | || || |||||||||||||
Sbjct 782 AGCGCGGACTCATGCCCGGCCTCACCTTCTCCAACGAGCTCATCTCGCGCGACGAGGGCA 841
Query 61622 TGCA 61625
||||
Sbjct 842 TGCA 845
>seq4264
Length=4713
Score = 190 bits (210), Expect = 2e-43
Identities = 392/582 (67%), Gaps = 6/582 (1%)
Strand=Plus/Plus
Query 66344 AATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCG 66403
|| || || |||||||| || || |||||||| ||||| || || || || |||||
Sbjct 2840 AAGAGGTCCGGTATCCACAGCGCATAGAAGAGGTCGCGGGCACGGGATTCTTCCTTGCCG 2899
Query 66404 TGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATG 66463
|| || || || | ||| ||||| ||||| | |||||| ||||| || || |||||||||
Sbjct 2900 TGGTTCTTACGGAGGTCAAGGAAGTCAAAAACGTCGGCGTGCCACGGCTCAAGGTAGATG 2959
Query 66464 GCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAG 66523
||||| | || |||||| ||| || ||||| |||||||| || || ||||
Sbjct 2960 GCGAAGGCACCGGGTCGTTTGTTGCCGCCCTGGTCAACGTAGCGGGCCGTCGCGTCGAAG 3019
Query 66524 ACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCT 66583
| || | ||| || |||| ||||| || |||| || || ||| | ||| || ||
Sbjct 3020 GCGCGAAGCATGGGCACGATACCGTTCGACATGCCGTTCGTACCGGCAATGTACGACCCG 3079
Query 66584 CGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCA 66643
|| || || | ||| | || || || || || || |||||||||||||| |||
Sbjct 3080 GTCGCACGAATGTTGTGGATGTTGAGGCCGATGCCGCCCGCCGTCTTCGAGATCATCGCA 3139
Query 66644 CAATCGGCCACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAG 66703
|| | | ||| | | ||||| || || ||||| |||| || | ||| ||
Sbjct 3140 CAGTTCTTGAGCGTCTCGTAGATGCCCTCGATCGAGTCGTCCTTCATACAGACCAGGAAG 3199
Query 66704 CATGAACTAAGTTGGGGTTTGGG---TGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGC 66760
|| || || ||| ||| | |||| |||| |||||| || || | ||||||
Sbjct 3200 CAGGACGCGAGCTGG---TTGTGCACTGTGCCGGCGTTGAAGAGCGTCGGCGAGGCGTGC 3256
Query 66761 GTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCA 66820
|| |||| || |||||||| | |||||||| || || ||||||| |||||
Sbjct 3257 GTGAAGTGGCGGTTCGACATGTAGTGATACGTCTCAATCGCACGCTCAATGTCCTCGCCG 3316
Query 66821 TGAATCCCGAGTGCACATCGCATCAGGAGGTATTGAGGCCGTTCGACCAGCCGATCCTTG 66880
|| || |||| || ||||| || |||| ||| || || || || | | | |||
Sbjct 3317 TGGATGCCGACGGCGACCCGCATGAGCAGGTGTTGCGGTCGCTCAACAACCTTGTTGTTG 3376
Query 66881 ATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGATACCAAAG 66922
|| | | | ||| || || || |||||||||| ||| |||
Sbjct 3377 ATCTTGAGGAGGTATGACCGCTCGAGGGTCTTGAAACCGAAG 3418
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397524929594960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |