Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limonomyces_20culmigenus_20[genbank_20GCA_5F002233555.1_202017-07- 25] 8,889 sequences; 36,136,062 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq522 244 8e-60 seq523 239 4e-58 seq4264 190 2e-43 >seq522 Length=1154 Score = 244 bits (270), Expect = 8e-60 Identities = 384/544 (71%), Gaps = 7/544 (1%) Strand=Plus/Plus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||| |||||||| ||||| || || || |||||||| | |||||| | || || Sbjct 304 ATATGGCAGATGTACAAGAAGGCTGAGGCCTCGTTCTGGACTGCCGAGGAGATGGACCTG 363 Query 61147 TCCAAAGACATGAATGACTGGG---AGCGTTT-ATCGAGCGGTGAACAACATTTCATTAA 61202 ||||| ||||| | |||||| | || | | ||| | || | || ||||| Sbjct 364 TCCAAGGACATCCACGACTGGAGCAACCGCCTGAACGA-CAACGAGCGTCACTTCATCTC 422 Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262 || || | || ||||| || || |||||||| |||||||| ||||| | | ||||| Sbjct 423 GCACGTCCTTGCCTTCTTCGCTGCCTCGGACGGCATCGTCAACGAGAACCTGCTCGAACG 482 Query 61263 TTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCAT 61322 ||| || |||||||| | | || ||||| || |||||||||||||||||| || Sbjct 483 CTTCTCGGGCGAGGTGCAGATCGCTGAAGCGCGCTGCTTCTACGGCTTCCAGATTATGAT 542 Query 61323 GGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGC 61382 |||||| ||||||| |||| ||| | |||||||| || ||||| | ||||| ||| Sbjct 543 GGAGAACATCCACTCTGAGACCTACTCGCTCCTCATCGACACATACATTAAGGAGCCGGC 602 Query 61383 GGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGA 61442 | | || || | ||| |||| |||||||| || || |||||||| || || || Sbjct 603 GCAGCGCGAGTTCCTCTTCGATGCGATCGAGACCATCCCCTGCGTGAAGCGCAAGGCTGA 662 Query 61443 TTGGGCCTTCAATTGGATC-ACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCAT 61501 ||||| ||| |||||| || | | | ||| | || || || || | | || | Sbjct 663 GTGGGCGCTCACGTGGATCAACGACGAGCAGAGCT-CGTTCGGCGAGCGCCTCGTTGCGT 721 Query 61502 TTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGA 61561 | || | |||||||| | || ||| || ||||| ||| | ||||| ||| | |||| Sbjct 722 TCGCCGCCGTCGAGGGCATCTTCTTCTCGGGCTCGTTCGCCTCCATCTTCTGGCTCAAGA 781 Query 61562 AACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCA 61621 | || ||||| |||||||| || |||||| ||| ||| | || || ||||||||||||| Sbjct 782 AGCGCGGACTCATGCCCGGCCTCACCTTCTCCAACGAGCTCATCTCGCGCGACGAGGGCA 841 Query 61622 TGCA 61625 |||| Sbjct 842 TGCA 845 >seq523 Length=1154 Score = 239 bits (264), Expect = 4e-58 Identities = 383/544 (70%), Gaps = 7/544 (1%) Strand=Plus/Plus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||| |||||||| ||||| || || || |||||||| | |||||| | || || Sbjct 304 ATATGGCAGATGTACAAGAAGGCTGAGGCCTCGTTCTGGACTGCCGAGGAGATGGACCTG 363 Query 61147 TCCAAAGACATGAATGACTGGG---AGCGTTT-ATCGAGCGGTGAACAACATTTCATTAA 61202 ||||| ||||| | |||||| | || | | ||| | || | || ||||| Sbjct 364 TCCAAGGACATCCACGACTGGAGCAACCGCCTGAACGA-CAACGAGCGTCACTTCATCTC 422 Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262 || || | || ||||| || || |||||||| |||||||| ||||| | | ||||| Sbjct 423 GCACGTCCTCGCCTTCTTCGCTGCCTCGGACGGCATCGTCAACGAGAACCTGCTCGAACG 482 Query 61263 TTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCAT 61322 ||| || |||||||| | | || ||||| || |||||||||||||||||| || Sbjct 483 CTTCTCGGGTGAGGTGCAGATCGCTGAAGCGCGCTGCTTCTACGGCTTCCAGATTATGAT 542 Query 61323 GGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGC 61382 |||||| ||||||| |||| ||| | |||||||| || ||||| | ||||| ||| Sbjct 543 GGAGAACATCCACTCTGAGACCTACTCGCTCCTCATCGACACATACATTAAGGAGCCGGC 602 Query 61383 GGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGA 61442 | | || || | ||| |||| |||||||| || || |||||||| || || || Sbjct 603 GCAGCGCGAGTTCCTCTTCGATGCGATCGAGACCATCCCCTGCGTGAAGCGCAAGGCTGA 662 Query 61443 TTGGGCCTTCAATTGGATC-ACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCAT 61501 ||||| ||| |||||| || | | | ||| | || || || || | | || | Sbjct 663 GTGGGCGCTCACGTGGATCAACGACGAGCAGAGCT-CGTTCGGCGAGCGCCTCGTTGCGT 721 Query 61502 TTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGA 61561 | || | |||||||| | || ||| || ||||| || | ||||| ||| | |||| Sbjct 722 TCGCCGCCGTCGAGGGCATCTTCTTCTCGGGCTCGTTCGCGTCCATCTTCTGGCTCAAGA 781 Query 61562 AACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCA 61621 | || ||||| |||||||| || |||||| ||| ||| | || || ||||||||||||| Sbjct 782 AGCGCGGACTCATGCCCGGCCTCACCTTCTCCAACGAGCTCATCTCGCGCGACGAGGGCA 841 Query 61622 TGCA 61625 |||| Sbjct 842 TGCA 845 >seq4264 Length=4713 Score = 190 bits (210), Expect = 2e-43 Identities = 392/582 (67%), Gaps = 6/582 (1%) Strand=Plus/Plus Query 66344 AATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCG 66403 || || || |||||||| || || |||||||| ||||| || || || || ||||| Sbjct 2840 AAGAGGTCCGGTATCCACAGCGCATAGAAGAGGTCGCGGGCACGGGATTCTTCCTTGCCG 2899 Query 66404 TGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATG 66463 || || || || | ||| ||||| ||||| | |||||| ||||| || || ||||||||| Sbjct 2900 TGGTTCTTACGGAGGTCAAGGAAGTCAAAAACGTCGGCGTGCCACGGCTCAAGGTAGATG 2959 Query 66464 GCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAG 66523 ||||| | || |||||| ||| || ||||| |||||||| || || |||| Sbjct 2960 GCGAAGGCACCGGGTCGTTTGTTGCCGCCCTGGTCAACGTAGCGGGCCGTCGCGTCGAAG 3019 Query 66524 ACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCT 66583 | || | ||| || |||| ||||| || |||| || || ||| | ||| || || Sbjct 3020 GCGCGAAGCATGGGCACGATACCGTTCGACATGCCGTTCGTACCGGCAATGTACGACCCG 3079 Query 66584 CGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCA 66643 || || || | ||| | || || || || || || |||||||||||||| ||| Sbjct 3080 GTCGCACGAATGTTGTGGATGTTGAGGCCGATGCCGCCCGCCGTCTTCGAGATCATCGCA 3139 Query 66644 CAATCGGCCACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAG 66703 || | | ||| | | ||||| || || ||||| |||| || | ||| || Sbjct 3140 CAGTTCTTGAGCGTCTCGTAGATGCCCTCGATCGAGTCGTCCTTCATACAGACCAGGAAG 3199 Query 66704 CATGAACTAAGTTGGGGTTTGGG---TGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGC 66760 || || || ||| ||| | |||| |||| |||||| || || | |||||| Sbjct 3200 CAGGACGCGAGCTGG---TTGTGCACTGTGCCGGCGTTGAAGAGCGTCGGCGAGGCGTGC 3256 Query 66761 GTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCA 66820 || |||| || |||||||| | |||||||| || || ||||||| ||||| Sbjct 3257 GTGAAGTGGCGGTTCGACATGTAGTGATACGTCTCAATCGCACGCTCAATGTCCTCGCCG 3316 Query 66821 TGAATCCCGAGTGCACATCGCATCAGGAGGTATTGAGGCCGTTCGACCAGCCGATCCTTG 66880 || || |||| || ||||| || |||| ||| || || || || | | | ||| Sbjct 3317 TGGATGCCGACGGCGACCCGCATGAGCAGGTGTTGCGGTCGCTCAACAACCTTGTTGTTG 3376 Query 66881 ATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGATACCAAAG 66922 || | | | ||| || || || |||||||||| ||| ||| Sbjct 3377 ATCTTGAGGAGGTATGACCGCTCGAGGGTCTTGAAACCGAAG 3418 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397524929594960