Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lyophyllum_20shimeji_20[genbank_20GCA_5F001950515.1_202016-12-09] 306 sequences; 52,434,773 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq58 262 1e-67 >seq58 Length=279924 Score = 262 bits (290), Expect = 1e-67 Identities = 193/224 (86%), Gaps = 1/224 (0%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| ||||| ||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 49090 CTTTTGTTCTACTTGAGATTTCTGTTCTCAATGAGTCCCCCTTAGGACACCTGCGTTATC 49031 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 49030 TTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAACCCGGATC 48971 Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAAT-GGTCGGTGAAGACCAGTTCCGCTTCATTG 185 |||| || | |||||||| |||| || | || | | || |||| ||||| |||||| Sbjct 48970 GGCCTGCAAGAGACCTTAAAGCCAAAAGGTGGGGCTATTAACCCCAGCTCCGCCTCATTG 48911 Query 186 ATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCC 229 | |||||||||| || |||| ||||||||||||||| | || || Sbjct 48910 AATAAGTAAAAAGACRATAAAGGTAGTGGTATTTCAATGGCACC 48867 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635194996288