Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Macrocystidia_20cucumis_20[genbank_20GCA_5F001179725.1_202015-07-08]
204,508 sequences; 46,746,859 total letters
Query= AAMG01000190.1
Length=117
Score E
Sequences producing significant alignments: (Bits) Value
seq133890 89.7 3e-16
seq195127 86.0 3e-15
seq193646 86.0 3e-15
seq188876 77.0 2e-12
seq121580 71.6 8e-11
seq63243 71.6 8e-11
seq53285 71.6 8e-11
>seq133890
Length=61
Score = 89.7 bits (98), Expect = 3e-16
Identities = 55/59 (93%), Gaps = 0/59 (0%)
Strand=Plus/Minus
Query 59 CCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
||||||||||||||||||||||||| |||| |||||| ||||||||||||||| |||||
Sbjct 61 CCGATCCCTAGTCGGCATAGTTTACTGTTACGACTACAACGGTATCTGATCGTTTTCGA 3
>seq195127
Length=61
Score = 86.0 bits (94), Expect = 3e-15
Identities = 53/57 (93%), Gaps = 0/57 (0%)
Strand=Plus/Minus
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
||||||||||||||||||||||| |||||| |||| ||||||||||||||| |||||
Sbjct 61 GATCCCTAGTCGGCATAGTTTACTGTTAAGCCTACAACGGTATCTGATCGTTTTCGA 5
>seq193646
Length=61
Score = 86.0 bits (94), Expect = 3e-15
Identities = 53/57 (93%), Gaps = 0/57 (0%)
Strand=Plus/Plus
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
||||||||||||||||||||||| |||||| |||| ||||||||||||||| |||||
Sbjct 1 GATCCCTAGTCGGCATAGTTTACTGTTAAGTCTACAACGGTATCTGATCGTTTTCGA 57
>seq188876
Length=52
Score = 77.0 bits (84), Expect = 2e-12
Identities = 48/52 (92%), Gaps = 0/52 (0%)
Strand=Plus/Minus
Query 64 CCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTC 115
|||||||||||||||||||| |||||||||| ||||||||||||||| |||
Sbjct 52 CCCTAGTCGGCATAGTTTACTTTTAAGACTACAACGGTATCTGATCGTTTTC 1
>seq121580
Length=61
Score = 71.6 bits (78), Expect = 8e-11
Identities = 44/47 (94%), Gaps = 0/47 (0%)
Strand=Plus/Minus
Query 57 GCCCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTAT 103
|||||||||||||||| |||||||||| ||||||||||| |||||||
Sbjct 47 GCCCGATCCCTAGTCGTCATAGTTTACTGTTAAGACTACAACGGTAT 1
>seq63243
Length=61
Score = 71.6 bits (78), Expect = 8e-11
Identities = 45/49 (92%), Gaps = 0/49 (0%)
Strand=Plus/Minus
Query 69 GTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
||||||||||||||| ||||||||||| || |||||||||||| |||||
Sbjct 61 GTCGGCATAGTTTACTGTTAAGACTACAACTGTATCTGATCGTTTTCGA 13
>seq53285
Length=61
Score = 71.6 bits (78), Expect = 8e-11
Identities = 44/47 (94%), Gaps = 0/47 (0%)
Strand=Plus/Minus
Query 57 GCCCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTAT 103
|||||||||||||||| |||||||||| ||||||||||| |||||||
Sbjct 47 GCCCGATCCCTAGTCGACATAGTTTACTGTTAAGACTACAACGGTAT 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 277866234120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |