Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrocystidia_20cucumis_20[genbank_20GCA_5F001179725.1_202015-07-08] 204,508 sequences; 46,746,859 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq149974 87.8 1e-15 seq145807 82.4 5e-14 seq77680 82.4 5e-14 seq16666 82.4 5e-14 seq195370 78.8 6e-13 seq173340 78.8 6e-13 seq125294 77.0 2e-12 seq146240 75.2 7e-12 seq121100 75.2 7e-12 seq112833 75.2 7e-12 seq45651 75.2 7e-12 seq15535 75.2 7e-12 seq2573 73.4 2e-11 >seq149974 Length=61 Score = 87.8 bits (96), Expect = 1e-15 Identities = 60/64 (94%), Gaps = 3/64 (5%) Strand=Plus/Minus Query 56 AGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACA 115 ||||||| || ||||||||| |||||||||||||||||||||||||||||||||||| || Sbjct 61 AGCCATT-CAATCGGTAGTA-GCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAAT-CA 5 Query 116 ACGC 119 |||| Sbjct 4 ACGC 1 >seq145807 Length=61 Score = 82.4 bits (90), Expect = 5e-14 Identities = 59/64 (92%), Gaps = 3/64 (5%) Strand=Plus/Plus Query 56 AGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACA 115 ||||||| || ||||||||| ||||||||||| |||||||||||||||||||||||| || Sbjct 1 AGCCATT-CAATCGGTAGTA-GCGACGGGCGGAGTGTACAAAGGGCAGGGACGTAAT-CA 57 Query 116 ACGC 119 |||| Sbjct 58 ACGC 61 >seq77680 Length=61 Score = 82.4 bits (90), Expect = 5e-14 Identities = 57/62 (92%), Gaps = 2/62 (3%) Strand=Plus/Plus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||||||||| || ||||||||| ||| ||||||| |||||||||||||||||||| Sbjct 2 CTCACTAAGCCATT-CAATCGGTAGTA-GCGCCGGGCGGTGTGTACAAAGGGCAGGGACG 59 Query 109 TA 110 || Sbjct 60 TA 61 >seq16666 Length=61 Score = 82.4 bits (90), Expect = 5e-14 Identities = 57/62 (92%), Gaps = 2/62 (3%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||||||||| || ||||||||| ||| ||||||| |||||||||||||||||||| Sbjct 60 CTCACTAAGCCATT-CAATCGGTAGTA-GCGGCGGGCGGTGTGTACAAAGGGCAGGGACG 3 Query 109 TA 110 || Sbjct 2 TA 1 >seq195370 Length=61 Score = 78.8 bits (86), Expect = 6e-13 Identities = 55/60 (92%), Gaps = 2/60 (3%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||||||||| || ||||||||| | ||||||||| |||||||||||||||||||| Sbjct 58 CTCACTAAGCCATT-CAATCGGTAGTAGG-GACGGGCGGTGTGTACAAAGGGCAGGGACG 1 >seq173340 Length=61 Score = 78.8 bits (86), Expect = 6e-13 Identities = 56/62 (90%), Gaps = 2/62 (3%) Strand=Plus/Minus Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121 |||| ||||||||| ||||||||||| ||| |||||||||||||||||||| |||||| | Sbjct 60 TTCAATCGGTAGTA-GCGACGGGCGGTGTGGACAAAGGGCAGGGACGTAAT-CAACGCGA 3 Query 122 GC 123 || Sbjct 2 GC 1 >seq125294 Length=61 Score = 77.0 bits (84), Expect = 2e-12 Identities = 55/61 (90%), Gaps = 2/61 (3%) Strand=Plus/Minus Query 64 CATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAGC 123 || ||||||||| ||||||||||| |||||| ||||||||||||||||| |||||| ||| Sbjct 61 CAATCGGTAGTA-GCGACGGGCGGTGTGTACGAAGGGCAGGGACGTAAT-CAACGCGAGC 4 Query 124 T 124 | Sbjct 3 T 3 >seq146240 Length=61 Score = 75.2 bits (82), Expect = 7e-12 Identities = 53/58 (91%), Gaps = 2/58 (3%) Strand=Plus/Plus Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGC 119 |||| ||||||||| ||||||||||| | |||||||||||||||||||||| |||||| Sbjct 4 TTCAATCGGTAGTA-GCGACGGGCGGTGGGTACAAAGGGCAGGGACGTAAT-CAACGC 59 >seq121100 Length=61 Score = 75.2 bits (82), Expect = 7e-12 Identities = 53/58 (91%), Gaps = 2/58 (3%) Strand=Plus/Plus Query 67 TCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAGCT 124 ||||||||| ||||||||||| ||||||| |||||||||||||||| |||||| |||| Sbjct 3 TCGGTAGTA-GCGACGGGCGGTGTGTACACAGGGCAGGGACGTAAT-CAACGCGAGCT 58 >seq112833 Length=61 Score = 75.2 bits (82), Expect = 7e-12 Identities = 53/58 (91%), Gaps = 2/58 (3%) Strand=Plus/Minus Query 67 TCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAGCT 124 ||||||||| ||||||||||| |||||||| ||||||||||||||| |||||| |||| Sbjct 60 TCGGTAGTA-GCGACGGGCGGTGTGTACAAGGGGCAGGGACGTAAT-CAACGCGAGCT 5 >seq45651 Length=61 Score = 75.2 bits (82), Expect = 7e-12 Identities = 53/58 (91%), Gaps = 2/58 (3%) Strand=Plus/Plus Query 67 TCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAGCT 124 ||||||||| ||||||||||| |||||||| ||||||||||||||| |||||| |||| Sbjct 2 TCGGTAGTA-GCGACGGGCGGTGTGTACAACGGGCAGGGACGTAAT-CAACGCGAGCT 57 >seq15535 Length=61 Score = 75.2 bits (82), Expect = 7e-12 Identities = 53/58 (91%), Gaps = 2/58 (3%) Strand=Plus/Plus Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGC 119 |||| ||||||||| ||||||||||| | |||||||||||||||||||||| |||||| Sbjct 4 TTCAATCGGTAGTA-GCGACGGGCGGTGCGTACAAAGGGCAGGGACGTAAT-CAACGC 59 >seq2573 Length=61 Score = 73.4 bits (80), Expect = 2e-11 Identities = 52/57 (91%), Gaps = 2/57 (4%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGG 105 |||||||||||||| || ||||||| | ||||||||||| ||||||||||||||||| Sbjct 55 CTCACTAAGCCATT-CAATCGGTAGGA-GCGACGGGCGGTGTGTACAAAGGGCAGGG 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300223287440