Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Macrocystidia_20cucumis_20[genbank_20GCA_5F001179725.1_202015-07-08]
204,508 sequences; 46,746,859 total letters
Query= AAMG01001382.1
Length=124
Score E
Sequences producing significant alignments: (Bits) Value
seq149974 87.8 1e-15
seq145807 82.4 5e-14
seq77680 82.4 5e-14
seq16666 82.4 5e-14
seq195370 78.8 6e-13
seq173340 78.8 6e-13
seq125294 77.0 2e-12
seq146240 75.2 7e-12
seq121100 75.2 7e-12
seq112833 75.2 7e-12
seq45651 75.2 7e-12
seq15535 75.2 7e-12
seq2573 73.4 2e-11
>seq149974
Length=61
Score = 87.8 bits (96), Expect = 1e-15
Identities = 60/64 (94%), Gaps = 3/64 (5%)
Strand=Plus/Minus
Query 56 AGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACA 115
||||||| || ||||||||| |||||||||||||||||||||||||||||||||||| ||
Sbjct 61 AGCCATT-CAATCGGTAGTA-GCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAAT-CA 5
Query 116 ACGC 119
||||
Sbjct 4 ACGC 1
>seq145807
Length=61
Score = 82.4 bits (90), Expect = 5e-14
Identities = 59/64 (92%), Gaps = 3/64 (5%)
Strand=Plus/Plus
Query 56 AGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACA 115
||||||| || ||||||||| ||||||||||| |||||||||||||||||||||||| ||
Sbjct 1 AGCCATT-CAATCGGTAGTA-GCGACGGGCGGAGTGTACAAAGGGCAGGGACGTAAT-CA 57
Query 116 ACGC 119
||||
Sbjct 58 ACGC 61
>seq77680
Length=61
Score = 82.4 bits (90), Expect = 5e-14
Identities = 57/62 (92%), Gaps = 2/62 (3%)
Strand=Plus/Plus
Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108
|||||||||||||| || ||||||||| ||| ||||||| ||||||||||||||||||||
Sbjct 2 CTCACTAAGCCATT-CAATCGGTAGTA-GCGCCGGGCGGTGTGTACAAAGGGCAGGGACG 59
Query 109 TA 110
||
Sbjct 60 TA 61
>seq16666
Length=61
Score = 82.4 bits (90), Expect = 5e-14
Identities = 57/62 (92%), Gaps = 2/62 (3%)
Strand=Plus/Minus
Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108
|||||||||||||| || ||||||||| ||| ||||||| ||||||||||||||||||||
Sbjct 60 CTCACTAAGCCATT-CAATCGGTAGTA-GCGGCGGGCGGTGTGTACAAAGGGCAGGGACG 3
Query 109 TA 110
||
Sbjct 2 TA 1
>seq195370
Length=61
Score = 78.8 bits (86), Expect = 6e-13
Identities = 55/60 (92%), Gaps = 2/60 (3%)
Strand=Plus/Minus
Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108
|||||||||||||| || ||||||||| | ||||||||| ||||||||||||||||||||
Sbjct 58 CTCACTAAGCCATT-CAATCGGTAGTAGG-GACGGGCGGTGTGTACAAAGGGCAGGGACG 1
>seq173340
Length=61
Score = 78.8 bits (86), Expect = 6e-13
Identities = 56/62 (90%), Gaps = 2/62 (3%)
Strand=Plus/Minus
Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121
|||| ||||||||| ||||||||||| ||| |||||||||||||||||||| |||||| |
Sbjct 60 TTCAATCGGTAGTA-GCGACGGGCGGTGTGGACAAAGGGCAGGGACGTAAT-CAACGCGA 3
Query 122 GC 123
||
Sbjct 2 GC 1
>seq125294
Length=61
Score = 77.0 bits (84), Expect = 2e-12
Identities = 55/61 (90%), Gaps = 2/61 (3%)
Strand=Plus/Minus
Query 64 CATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAGC 123
|| ||||||||| ||||||||||| |||||| ||||||||||||||||| |||||| |||
Sbjct 61 CAATCGGTAGTA-GCGACGGGCGGTGTGTACGAAGGGCAGGGACGTAAT-CAACGCGAGC 4
Query 124 T 124
|
Sbjct 3 T 3
>seq146240
Length=61
Score = 75.2 bits (82), Expect = 7e-12
Identities = 53/58 (91%), Gaps = 2/58 (3%)
Strand=Plus/Plus
Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGC 119
|||| ||||||||| ||||||||||| | |||||||||||||||||||||| ||||||
Sbjct 4 TTCAATCGGTAGTA-GCGACGGGCGGTGGGTACAAAGGGCAGGGACGTAAT-CAACGC 59
>seq121100
Length=61
Score = 75.2 bits (82), Expect = 7e-12
Identities = 53/58 (91%), Gaps = 2/58 (3%)
Strand=Plus/Plus
Query 67 TCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAGCT 124
||||||||| ||||||||||| ||||||| |||||||||||||||| |||||| ||||
Sbjct 3 TCGGTAGTA-GCGACGGGCGGTGTGTACACAGGGCAGGGACGTAAT-CAACGCGAGCT 58
>seq112833
Length=61
Score = 75.2 bits (82), Expect = 7e-12
Identities = 53/58 (91%), Gaps = 2/58 (3%)
Strand=Plus/Minus
Query 67 TCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAGCT 124
||||||||| ||||||||||| |||||||| ||||||||||||||| |||||| ||||
Sbjct 60 TCGGTAGTA-GCGACGGGCGGTGTGTACAAGGGGCAGGGACGTAAT-CAACGCGAGCT 5
>seq45651
Length=61
Score = 75.2 bits (82), Expect = 7e-12
Identities = 53/58 (91%), Gaps = 2/58 (3%)
Strand=Plus/Plus
Query 67 TCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAGCT 124
||||||||| ||||||||||| |||||||| ||||||||||||||| |||||| ||||
Sbjct 2 TCGGTAGTA-GCGACGGGCGGTGTGTACAACGGGCAGGGACGTAAT-CAACGCGAGCT 57
>seq15535
Length=61
Score = 75.2 bits (82), Expect = 7e-12
Identities = 53/58 (91%), Gaps = 2/58 (3%)
Strand=Plus/Plus
Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGC 119
|||| ||||||||| ||||||||||| | |||||||||||||||||||||| ||||||
Sbjct 4 TTCAATCGGTAGTA-GCGACGGGCGGTGCGTACAAAGGGCAGGGACGTAAT-CAACGC 59
>seq2573
Length=61
Score = 73.4 bits (80), Expect = 2e-11
Identities = 52/57 (91%), Gaps = 2/57 (4%)
Strand=Plus/Minus
Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGG 105
|||||||||||||| || ||||||| | ||||||||||| |||||||||||||||||
Sbjct 55 CTCACTAAGCCATT-CAATCGGTAGGA-GCGACGGGCGGTGTGTACAAAGGGCAGGG 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 300223287440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |