Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrocystidia_20cucumis_20[genbank_20GCA_5F001179725.1_202015-07-08] 204,508 sequences; 46,746,859 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq30363 87.8 3e-15 seq174070 86.0 1e-14 seq135865 86.0 1e-14 seq107566 86.0 1e-14 seq39708 86.0 1e-14 seq194562 84.2 4e-14 seq131956 84.2 4e-14 seq75802 82.4 1e-13 seq151833 78.8 2e-12 seq51115 78.8 2e-12 seq165640 77.0 5e-12 seq174493 75.2 2e-11 seq150570 75.2 2e-11 seq90213 73.4 6e-11 seq70634 73.4 6e-11 >seq30363 Length=61 Score = 87.8 bits (96), Expect = 3e-15 Identities = 56/61 (92%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 63 CGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCAGA 122 |||||||||| ||||||||||||||||||| |||||||||||| |||||||| ||| ||| Sbjct 61 CGCGAAGCTATCATCTGCTGGATTATGGCTTAACGCCTCTAAGCCAGAATCCGTGCTAGA 2 Query 123 A 123 | Sbjct 1 A 1 >seq174070 Length=61 Score = 86.0 bits (94), Expect = 1e-14 Identities = 55/60 (92%), Gaps = 0/60 (0%) Strand=Plus/Plus Query 55 GGCAGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 |||| || |||||||||| ||||||||||| |||||||||||||||||||| |||||||| Sbjct 1 GGCAATGGCGCGAAGCTATCATCTGCTGGACTATGGCTGAACGCCTCTAAGCCAGAATCC 60 >seq135865 Length=61 Score = 86.0 bits (94), Expect = 1e-14 Identities = 55/60 (92%), Gaps = 0/60 (0%) Strand=Plus/Plus Query 63 CGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCAGA 122 |||||||||| |||||||||||||||||| ||||||||||||| |||||||| ||| ||| Sbjct 2 CGCGAAGCTATCATCTGCTGGATTATGGCGGAACGCCTCTAAGCCAGAATCCGTGCTAGA 61 >seq107566 Length=61 Score = 86.0 bits (94), Expect = 1e-14 Identities = 55/60 (92%), Gaps = 0/60 (0%) Strand=Plus/Minus Query 55 GGCAGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 |||| || |||||||||| |||||||||| ||||||||||||||||||||| |||||||| Sbjct 60 GGCAATGGCGCGAAGCTATCATCTGCTGGCTTATGGCTGAACGCCTCTAAGCCAGAATCC 1 >seq39708 Length=61 Score = 86.0 bits (94), Expect = 1e-14 Identities = 55/60 (92%), Gaps = 0/60 (0%) Strand=Plus/Minus Query 55 GGCAGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 |||| || |||||||||| ||||||||||| |||||||||||||||||||| |||||||| Sbjct 61 GGCAATGGCGCGAAGCTATCATCTGCTGGAGTATGGCTGAACGCCTCTAAGCCAGAATCC 2 >seq194562 Length=61 Score = 84.2 bits (92), Expect = 4e-14 Identities = 54/59 (92%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 65 CGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCAGAA 123 |||||||| ||||||||||||||||||||| |||||||||| |||||||| ||| |||| Sbjct 61 CGAAGCTATCATCTGCTGGATTATGGCTGACCGCCTCTAAGCCAGAATCCGTGCTAGAA 3 >seq131956 Length=61 Score = 84.2 bits (92), Expect = 4e-14 Identities = 54/59 (92%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 65 CGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCAGAA 123 |||||||| ||||||||||||||||||||| |||||||||| |||||||| ||| |||| Sbjct 1 CGAAGCTATCATCTGCTGGATTATGGCTGAGCGCCTCTAAGCCAGAATCCGTGCTAGAA 59 >seq75802 Length=61 Score = 82.4 bits (90), Expect = 1e-13 Identities = 53/58 (91%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 66 GAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCAGAA 123 ||||||| |||||||||||||||||||||| ||||||||| |||||||| ||| |||| Sbjct 1 GAAGCTATCATCTGCTGGATTATGGCTGAAAGCCTCTAAGCCAGAATCCGTGCTAGAA 58 >seq151833 Length=61 Score = 78.8 bits (86), Expect = 2e-12 Identities = 51/56 (91%), Gaps = 0/56 (0%) Strand=Plus/Plus Query 68 AGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCAGAA 123 ||||| |||||||||||||||||||||||| ||||||| |||||||| ||| |||| Sbjct 1 AGCTATCATCTGCTGGATTATGGCTGAACGACTCTAAGCCAGAATCCGTGCTAGAA 56 >seq51115 Length=61 Score = 78.8 bits (86), Expect = 2e-12 Identities = 54/61 (89%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 45 TGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAA 104 |||| || | |||| || |||||||||| | ||||||||||||||||||||||||||||| Sbjct 1 TGTCCGATCGGGCAATGGCGCGAAGCTATCCTCTGCTGGATTATGGCTGAACGCCTCTAA 60 Query 105 G 105 | Sbjct 61 G 61 >seq165640 Length=61 Score = 77.0 bits (84), Expect = 5e-12 Identities = 53/60 (88%), Gaps = 0/60 (0%) Strand=Plus/Minus Query 46 GTCTGACCAGGCAGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAG 105 ||| || | |||| || |||||||||| || ||||||||||||||||||||||||||||| Sbjct 61 GTCCGATCGGGCAATGGCGCGAAGCTATCAGCTGCTGGATTATGGCTGAACGCCTCTAAG 2 >seq174493 Length=61 Score = 75.2 bits (82), Expect = 2e-11 Identities = 53/61 (87%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 37 TTTGCGGCTGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAAC 96 |||||| ||||| || | |||| || |||| ||||| ||||||||||||||||||||||| Sbjct 1 TTTGCGCCTGTCCGATCGGGCAATGGCGCGCAGCTATCATCTGCTGGATTATGGCTGAAC 60 Query 97 G 97 | Sbjct 61 G 61 >seq150570 Length=61 Score = 75.2 bits (82), Expect = 2e-11 Identities = 53/61 (87%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 38 TTGCGGCTGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACG 97 ||||| ||||| || | |||| || ||||| |||| |||||||||||||||||||||||| Sbjct 61 TTGCGCCTGTCCGATCGGGCAATGGCGCGACGCTATCATCTGCTGGATTATGGCTGAACG 2 Query 98 C 98 | Sbjct 1 C 1 >seq90213 Length=48 Score = 73.4 bits (80), Expect = 6e-11 Identities = 45/48 (94%), Gaps = 0/48 (0%) Strand=Plus/Plus Query 64 GCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAA 111 ||||||||| |||||||||||||||||||| ||||||||||| ||||| Sbjct 1 GCGAAGCTATCATCTGCTGGATTATGGCTGTACGCCTCTAAGCCAGAA 48 >seq70634 Length=61 Score = 73.4 bits (80), Expect = 6e-11 Identities = 46/50 (92%), Gaps = 0/50 (0%) Strand=Plus/Minus Query 74 CATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCAGAA 123 |||||||||||||||||||||||||||||| | |||||||| ||| |||| Sbjct 61 CATCTGCTGGATTATGGCTGAACGCCTCTACGCCAGAATCCGTGCTAGAA 12 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 817577024512