Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20caprae_20[genbank_20GCA_5F001264625.1_202015-08-11] 229 sequences; 7,580,816 total letters Query= AAMG01001844.1 Length=290 Score E Sequences producing significant alignments: (Bits) Value seq129 215 9e-54 >seq129 Length=624 Score = 215 bits (238), Expect = 9e-54 Identities = 220/283 (78%), Gaps = 3/283 (1%) Strand=Plus/Plus Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60 |||||||||||| |||||||||||| || || |||| || |||||||||||| ||| | Sbjct 214 CCCACGCTTTCGTACCTCAGCGTCAGATAATGGCCAGAAAGTCGCCTTCGCCACCGGTAT 273 Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCAC 120 || ||| |||||| |||||| ||||||||||| |||||||| || || |||| | Sbjct 274 TCTTCCTAATATCTGCGCATTCCACCGCTACACTAGGAATTCCACTTTCCCTTCCATTTC 333 Query 121 TCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAG-TTTTCACATCTGAC 179 ||||| ||| ||||| | | || |||| |||||| | |||| ||| || ||| || Sbjct 334 TCAAGCTAAATAGTTTTAGAAGCTTACTAT-AGTTGAG-CTATAGCCTTTGACTTCTAAC 391 Query 180 TTGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTAC 239 || || |||||||| |||||||| |||||| | |||||| |||||| | | ||| Sbjct 392 TTTTCTAGCCGCCTACGTACCCTTTACGCCCAATGATTCCGGACAACGCTCGGTCCTTAC 451 Query 240 GTATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTC 282 ||||||||||||||||||||||||| ||||||| ||||||| Sbjct 452 GTATTACCGCGGCTGCTGGCACGTAATTAGCCGGACCTTATTC 494 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 828798161359