Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20caprae_20[genbank_20GCA_5F001264625.1_202015-08-11] 229 sequences; 7,580,816 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq14 324 1e-83 seq8 307 8e-79 >seq14 Length=25249 Score = 324 bits (358), Expect = 1e-83 Identities = 1106/1689 (65%), Gaps = 40/1689 (2%) Strand=Plus/Minus Query 65240 CCACGATCTGCAGCCATGTCAATGATACGACGTCCCGATA-TCTCCCAGACGGTCTTGTA 65298 ||||| || |||||||||||||| || | | | | || ||||||| || |||||||| Sbjct 7952 CCACGGTCCGCAGCCATGTCAATAAT-CACCTTTTGGCTAATCTCCCACACCGTCTTGTA 7894 Query 65299 CAGGCGACGT-ACCTCAATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAA 65357 ||| | | | | | ||||| | |||||| ||||| || || | | |||| Sbjct 7893 GAGG-GCCTTGATGTGGTCGGGAATGCCAGCAATGTTCTGGATCGAGCCGCCGTGCGCAA 7835 Query 65358 TAATGCGATTACG-CATCGACTCTGACCACAAACCCAAATCGATAAGATGTTGAACCAAG 65416 |||| | || | |||||| || ||| | ||||| |||| ||| | | | || | Sbjct 7834 TAAT-CTTTTGCTTCATCGAGTCGTTCCAGAGACCCAGCTCGACAAGCTCGCGCAGCA-G 7777 Query 65417 TGACGA-TTGATGACTTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGT 65475 ||| |||| || ||||||||||| | ||||||||| || | || |||||| ||| Sbjct 7776 CCACGGGTTGACCACCTGGAACTCGCCCGCCAGTACACGGCGCATGTAAATGTTGCTCGT 7717 Query 65476 GATGGGTTCAAAGGATTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGG 65535 | || |||||| | || || ||| || || ||| || || || || ||||| || Sbjct 7716 GTACGGCTCAAAGCACTCGTTGAAGCCGAGGATCTGGCTCGTGGAGGCCGTCGGCATCGG 7657 Query 65536 AGCGACCAACAATGAGTTTCGCAATCCGTTCATTTCAATGTTGTGACGCAATTCGT--CC 65593 || | || || ||||| |||| |||| | |||| | | | | | ||| || Sbjct 7656 CGCCATCAGCAGCGAGTTCCGCAGACCGTGCTGGGCAATCT-GCGCCTTGAG-CGTGGCC 7599 Query 65594 CAGTTCCACATCGGTTTATCGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCG 65653 |||| ||||| ||| ||||| | | | ||||| || | |||||| || Sbjct 7598 CAGTCCCACA--GGTC---CGTCGGCGGGCG-GTTCCACAGGTCGTACTGCAGGAGGCCC 7545 Query 65654 ATACTGGCCGGTGAACCGAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAG 65713 ||| || || | | | |||||| || | || || || | ||| Sbjct 7544 TGCGAGGCGGGGCTGCCCTCGTACGTCTCGTACGGGCCATATTCGGCAGCCAGCTCGCAG 7485 Query 65714 CTGGTCTCGAGTGCGGCAAAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCC 65773 ||| ||| || || ||| || ||||||||||| || | || || || ||| Sbjct 7484 CTGCGCTCCAGGGCCGCATGGTAGATGGTCTCGAAGATTTGCACGTTCAGCAGGCGCGCC 7425 Query 65774 TCATCGCTCTCGTACGGCATA-CCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCC 65832 || | ||| ||| |||| ||| ||||| | | || | ||||| ||||| || || || Sbjct 7424 TCCTGGCTGTCGAACGG-ATAGCCCATGATCATGAACGCATCGGCAAGACCCTGGACACC 7366 Query 65833 AATACCGATGGGACGATGACGCAAATTGGAACGTCTCGC-CTCAGGTACAGGGTAGTAAT 65891 ||||| ||||| || ||||||| || || || | ||| ||| || |||||||| | Sbjct 7365 GATACCAATGGGCCGGTGACGCATGTTCGAGCGGCGCGCGCTCTCC-ACGGGGTAGTAGT 7307 Query 65892 TGATATCGATAATGCGATTCAAATTGCGTGT-CACCACATGCACGATACGTC--GCAATT 65948 |||| ||||| ||||| |||| || | || |||||| | | || ||||| ||| Sbjct 7306 TGATGTCGATGATGCGGTTCAGGTT-CTTGCACACCACCTTC--GACACGTCATGCAGGC 7250 Query 65949 GTTCGAAATCAAAATGTTTAGGACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGG 66008 | | ||| | | || | || | | || |||| | | | ||| | || || | Sbjct 7249 GCTGGAAGTTGTAC-GTCTTCGAGGCGCCGG--TGCC---CTCGATGAACGTCGGCAGCG 7196 Query 66009 CAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGG 66068 ||| || || |||||||| ||||| ||||||| || | | | ||||||| ||| || | Sbjct 7195 CAATCGACGCCAGGTTGCACACAGCCGTCTCGTCCGGCGAGCTGTACTCGATAATCTCCG 7136 Query 66069 TGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATG 66128 ||||||| || || || ||||||| |||| || || |||||||| || | Sbjct 7135 TGCACAGGTTCGAGCTCTTGATCGTGCCCAGGTTCTTCTGGTTGCTCTTGCGGTTCGCCG 7076 Query 66129 CATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCC 66188 |||||||||| | | | || |||| ||||| | || | ||| | ||||| | || Sbjct 7075 AGTCCTTGTACAGGACGAAGGGGTTGCCCGTCTCGATCTGTGCCTCGAGAATGGCATACC 7016 Query 66189 AAAGAGCGCGTGCCTTCACCGTACGTACCGCCCTACCTTTGCGTTCGTAATGTTCGTAGA 66248 | || | ||||| || | || || | || | ||| ||||| | ||||||| Sbjct 7015 ACAGCTTCTGCGCCTTGACAGAGCGCTTGGCGCGGCCCTCGCGCTCGTATTTCTCGTAGA 6956 Query 66249 GGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCA 66308 | || || ||| || | |||| ||| | || |||| | || ||||||| Sbjct 6955 GAGCATCAAATTCTTCGCCATAGCAGTCGGCCAGGCCGGGGCACTCGGCGGGGCACATCA 6896 Query 66309 GCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGT 66368 ||||||| || || | ||| || || || ||||| || | ||||| ||||| || || Sbjct 6895 GCGACCAGTCGCCGTTCTGCTCGACGCGGCGCATGAACAAGTCAGGAATCCACAGCGCCA 6836 Query 66369 AGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACT 66428 ||| || ||||| || || |||||| | ||||| |||||||||| || | ||||| Sbjct 6835 GGAACAGGTCGCGCGCGCGCACCTCCTCCTTACCGTGGTTTTTGCGCAGATCAATGAACT 6776 Query 66429 CAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGC 66488 | || | ||| | ||||| || |||||||||||||| || | || ||| ||| || Sbjct 6775 CGAACACGTCCGAGTGCCACGGCTCCAGGTAGATGGCAAAGGCACCGGGACGCTTGTTGC 6716 Query 66489 CACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGT 66548 |||| ||||| |||||||| || |||||| | || || | ||| || || | |||| Sbjct 6715 CACCCTGGTCCACGTAGCGCGCTGTGTTGTTGTATACGCGGAGCATGGGCACAATACCGT 6656 Query 66549 TAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCA 66608 | |||||| || ||| | ||| || || ||| || || | ||| | ||||| Sbjct 6655 TGCTCACGCCATTCGTACCGGCAATGTACGAGCCCGTTGCACGGATGTTGTGGATATTCA 6596 Query 66609 GACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAATCGGC--CACTGTCCGGAATAT 66666 |||||||||||||||||||||| ||| || | | || | | || | | || Sbjct 6595 GACCAATACCACCGGCCGTCTTGCTGAT--CATCGCGCACGTCTTGAGCGTGTCGTAGAT 6538 Query 66667 GCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGG 66726 || || || ||||| |||| ||| ||| ||| |||| || | |||||| ||||| Sbjct 6537 ACCCTCGATAGAGTCGTCCTTCATGCTCACAAGGAAGCAGGACGACATTTGGGGGTTGGG 6478 Query 66727 TGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATT 66786 ||| | || ||| ||||| || | ||||| |||||| | |||||||| || Sbjct 6477 CGTGCCAGCATTGAACAGGGTCGGCGACGCGTGTGTAAAGGCCTTCTCGGACATGTAGTT 6418 Query 66787 GTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTGC-ACATCGCATCA 66845 ||| ||||| ||| | | | | ||||| || || || | || ||| ||||| | Sbjct 6417 GTATGTCTCAATGGCGCTCTTCACATCCTCGCCGTGGATGCCCACAGCGACA-CGCATGA 6359 Query 66846 GGAGGTATTGAGGCCGTTCGACCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCA 66905 | | || || || || || | | | | ||||| ||| | ||||||||| |||| Sbjct 6358 GCATGTGCTGGGGGCGCTCCGCGACCTTGCCATTGATGCGCAGCAGGTAGGAGCGCTCCA 6299 Query 66906 GGGTCTTGA 66914 | ||||||| Sbjct 6298 GCGTCTTGA 6290 >seq8 Length=40485 Score = 307 bits (340), Expect = 8e-79 Identities = 614/893 (69%), Gaps = 34/893 (4%) Strand=Plus/Plus Query 61054 CGTTTCGTATTGTTCCCCATCGAGTATGAGGATATTTGGCGCATGTACAAAAAGGCGGAA 61113 |||||||| | ||||| ||| || | || || |||| |||||||| ||||| || Sbjct 4647 CGTTTCGTGCTCTTCCCGATCCGCTACCACGAGATCTGGCAGATGTACAAGAAGGCCGAG 4706 Query 61114 GCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACTGGGAGCGT 61173 || || |||||||| | |||||| | || |||| || ||| || | |||||||| | Sbjct 4707 GCGTCGTTCTGGACCGCCGAGGAGATGGACCTGTCGAAGGACCTGCACGACTGGGACCAC 4766 Query 61174 ----TTATCGAGCGGTGAACAACATTTCATTAAACATGTGTTGGCGTTCTTTGCCGCTTC 61229 | | ||| | ||| | || || | | ||||| |||| |||||||| || || Sbjct 4767 CGCATGAACGA-CAATGAGCGCCACTTTGTAAGCCATGTCCTGGCCTTCTTTGCTGCCTC 4825 Query 61230 GGACGGTATCGTCAATGAGAATTTATTGGAACGTTTC-GCGCAGGAGGTGCAAGTGTCGG 61288 ||||| |||||||| ||||| | |||| || ||| |||| | ||||||| | | | Sbjct 4826 AGACGGCATCGTCAACGAGAACCTGGTGGAGCGCTTCAGCGCCG-AGGTGCAGGCCGCTG 4884 Query 61289 AGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGTACA 61348 |||| || || ||||||||||| |||||| |||||||| |||||||||||| |||| Sbjct 4885 AGGCCCGCTGCTTCTACGGCTTTCAGATTATGATGGAGAACATCCACTCGGAGACGTACT 4944 Query 61349 GTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGAACGATTGTTCAATGCCA 61408 | ||||| || ||||||||| | ||| || | | || ||| | || || |||| Sbjct 4945 CGCTCCTCATTGACACGTACATCCGTGAGTCGGAGCAGCGCGAATACCTCTTTAACGCCA 5004 Query 61409 TCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGGATCACCAGTA 61468 ||||||| || || | || |||| ||| || || |||||||| |||||| | | | Sbjct 5005 TCGAGACCATCCCTGTCGTCAAGCAGAAGGCCGAGTGGGCCTTGCGCTGGATCTC--GGA 5062 Query 61469 CAA-CG-GCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTT 61526 ||| || || | || || || || | || ||||| | |||||||| | ||||| Sbjct 5063 CAAGCGCGCCTCGTTCTCGGAGCGCCTGGTCGCCTTTGCCGCCGTCGAGGGCATCTTTTT 5122 Query 61527 CAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCTGAC 61586 | || ||||||||| | ||||||||| | ||||| || || || ||||| || ||| | Sbjct 5123 CTCGGGCTCGTTTGCCTCCATCTTTTGGCTCAAGAAGCGCGGTCTCATGCCTGGCCTGTC 5182 Query 61587 CTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATTTTG-CTG--TTTT 61643 ||| || ||| | || || || |||||||| |||| || |||| ||| | || Sbjct 5183 GTTCTCGAACGAGCTCATCTCGCGTGACGAGGGTCTGCACACCGACTTTGCCTGCCTCTT 5242 Query 61644 GCTATTCAAACGCTATCTGGTGAATCGTCCGTCGGAGGAGCGTGTGGGTGA----GATTG 61699 | |||| || | ||| ||| || || || | || ||||| || Sbjct 5243 G---TTCA---GCCACCTGAAGAAGCG--CG-CGCA-CCCCGACACGGTGAACCGCATCA 5292 Query 61700 TTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGCCCGTCTCACTCA 61759 | ||||| || | || || ||||| ||| |||| ||||| |||||||||| || | Sbjct 5293 TCACCGAGGCCGTGGCCATTGAGCAGGACTTTTTGACCGACGCCCTGCCCGTCTCGCTGA 5352 Query 61760 TCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGACCGTCTGTTGG 61819 |||||||||| | || |||| ||||| ||||| ||||| |||||||| ||| ||| Sbjct 5353 TCGGCATGAACGCGCGCCTCATGTGCCAGTACATTGAGTTTGTGGCCGACCGCCTGCTGG 5412 Query 61820 TCGATTTGGGTA---TGAAGCGGATCTATAATACGAAAAACCCATTTGATTTCATGGACA 61876 || | | || | |||| ||| || || ||||| ||||| || ||||| | Sbjct 5413 TCAACCTCGGCAACCCCAAGC---ACTACAACTCGGCGAACCCCTTTGACTTTATGGAGA 5469 Query 61877 TGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGTGTAGGCGACTAT 61929 |||||||| | |||||| |||| ||||||||| || || | ||||||| Sbjct 5470 ACATTTCGCTCCAGGGCAAGTCGAACTTTTTCGAGCGCCGCGTGGCCGACTAT 5522 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397566890412560