Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20caprae_20[genbank_20GCA_5F001264625.1_202015-08-11] 229 sequences; 7,580,816 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq199 147 9e-30 >seq199 Length=10002 Score = 147 bits (162), Expect = 9e-30 Identities = 359/528 (68%), Gaps = 31/528 (6%) Strand=Plus/Minus Query 448639 GGCGCCGTAGGACTTGAAGGAGACGCGCTCCATGTCGCCCAATCGGAGCCCGCCGTGTCG 448698 |||||||||| ||| | || |||||||||| ||||| | || || || |||| || Sbjct 6443 GGCGCCGTAGCCGATGAGGCAGTCGCGCTCCATCTCGCCGAGACGCAGGCCACCGTCGCG 6384 Query 448699 -CAACTTGCCCTCGGTGGGCTGCCGCGTGAGGAGCGAGTACGGTCCCCTCTGCCGCGTGT 448757 | | | |||||||| ||||| |||||||| | | | ||| || | | |||| || Sbjct 6383 GCTGCGT-CCCTCGGTCGGCTGGCGCGTGAGCACGGCGCGCGGGCCGCGCGCGCGCGCGT 6325 Query 448758 GCATCTTCTCCGAGGCCAGTTGCTTGAGGCTCTGGAAGAAGAAGGGCGCGTAGAACATGC 448817 ||||||| ||| | ||| |||||||| ||||| || ||| || | || ||| | Sbjct 6324 GCATCTTGTCCATGACCATGTGCTTGAGCTTCTGGTAGTAGATCGGGCCAAAGTACACGT 6265 Query 448818 GGCACGGCATCAT----CTCGCCCGTCTGGCCGTCCGTAAAGATCGTCTTGCCCTCGGGC 448873 ||| | ||| |||||| ||| |||| ||| | | | |||| || | | Sbjct 6264 ---ACGCC-TCAAGTGGCTCGCCGGTCGTGCCGCTCGTCAGG-TATTCTTTGCCGCCG-- 6212 Query 448874 TCGATCATGCCCCTCTCCTCCATGTAGT---CCATGAGCTCGGCCACG-GAGAGGTCCGA 448929 | | | ||| ||| | | | | | ||||| ||| ||| | ||| ||| Sbjct 6211 TAGTTGTAGCCGTTCTGCACGAGGATGCGCGCCATGTCTTCG---ACGCGCGAG--CCGC 6157 Query 448930 -AAAGGCCGTGCCGTCCTGCGGCAAGCCGC---TCTCACAGCCCGTGATGGCCTGGAGGG 448985 |||||||||||||| |||| || ||||| || ||| | || || |||| | || Sbjct 6156 CAAAGGCCGTGCCGTACTGCAGCGAGCCGTCAATCACACCGGCCTTGCCGGCCAGCAG-- 6099 Query 448986 CCTCGAGCAACATGGCGTAGGTCATGCGCGACGGGTAGGCATGCGGGTTCATGATGATGT 449045 ||||| || | || || ||||||||||||||| || | || |||||||| ||||||| Sbjct 6098 -CTCGATCATCTTGCCGACCGTCATGCGCGACGGGAAGCCGTGGGGGTTCATAATGATGT 6040 Query 449046 C-GGGCGTCTCGCCGGCCGCGTTGAAGGGCATGTCCTCGGGGTTGACCACCAGGCCGTTG 449104 | ||| | | ||| | | |||| ||||||||||| || || | |||||| Sbjct 6039 CAGGGTGGAT-GCCATCGTCCGTGAACGGCATGTCCTCCTGGGGCACAATCAGGCCACAC 5981 Query 449105 ACGCCCTTCTGGCCGTGGCGGCTGCAGAACTTGTCCCCCTGCTCGGGC 449152 |||||||||||||||||||| | |||||||||| ||| |||||||| Sbjct 5980 ACGCCCTTCTGGCCGTGGCGCGAGGAGAACTTGTCGCCCAGCTCGGGC 5933 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084732934055742