Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20cuniculi_20[genbank_20GCA_5F001264635.1_202015-08-11] 76 sequences; 7,459,907 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq10 360 8e-97 seq48 105 3e-20 >seq10 Length=96806 Score = 360 bits (398), Expect = 8e-97 Identities = 258/295 (87%), Gaps = 3/295 (1%) Strand=Plus/Minus Query 379 TAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAA 438 ||||||||||||||||||| | ||||||||||||||| ||||||||||||||||||||| Sbjct 3126 TAGGATGCTGGCGTAATGGCTCCAAGCGGCCCGTCTTGAAACACGGACCAAGGAGTCTAA 3067 Query 439 CATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGG 498 ||| | ||||||| |||||||| ||||||| || ||| |||||||||||| | ||||||| Sbjct 3066 CATGTGTGCGAGTTTTTGGGTGGCAAACCCATGAGCGCAATGAAAGTGAATGCAGGTGGG 3007 Query 499 AACCCGTGAGGGTGCACCATCGACC-GATCCTGATGTCTTCGGATGGATTTGAGTAAGAG 557 | || | || |||||||||||| | ||| | || || ||||| |||||| ||| Sbjct 3006 ATCCGC--AAGGAGCACCATCGACCAGTTCCCCAATTCAGTGGTTGGATCTGAGTACGAG 2949 Query 558 CATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAA 617 |||| ||||||||||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct 2948 CATATATGTTGGGACCCGAAAGATGGTGAACTATGCCCGAATAGGGCGAAGCCAGAGGAA 2889 Query 618 ACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGG 672 |||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 2888 ACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATTTGGG 2834 >seq48 Length=4779 Score = 105 bits (116), Expect = 3e-20 Identities = 76/88 (86%), Gaps = 0/88 (0%) Strand=Plus/Minus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||||||||||||||| |||||||| || |||| |||| | | | ||||||||||||| Sbjct 88 GAGTCGAGTTGTTTGGGATTGCAGCTCAAAGTGGGTGGTAGACTCCATCTAAAGCTAAAT 29 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGT 127 || || |||||||||||||| |||||| Sbjct 28 ATCGGGGAGAGACCGATAGCGAACAAGT 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079998369800