Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20cuniculi_20[genbank_20GCA_5F001264635.1_202015-08-11] 76 sequences; 7,459,907 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq3 109 2e-18 seq56 87.8 7e-12 >seq3 Length=112765 Score = 109 bits (120), Expect = 2e-18 Identities = 328/501 (65%), Gaps = 19/501 (4%) Strand=Plus/Minus Query 448659 AGACGCGCTCCATGTCGCCCAATCGGAGCCCGCCGTGTCGCAACTTGCCCTCGGTGGGCT 448718 || |||||||||| ||||| | || || ||||||| ||| | |||||| || |||| Sbjct 49811 AGTCGCGCTCCATCTCGCCGAGACGCAGACCGCCGTCGCGCGAGCGGCCCTCCGTCGGCT 49752 Query 448719 GCCGCGTGAGGAGCGAGTACGGTCCCCTCTGCCGCGTGTGCATCTTCTCCGAGGCCAGTT 448778 ||||||| || | || |||||| | | |||| |||||||| ||| ||| | Sbjct 49751 GCCGCGTAAGCACCGCACGCGGTCCGCGCGCACGCGCATGCATCTTGTCCATAACCATGT 49692 Query 448779 GCTTGAGGCTCTGGAAGAAGAAGGGCGCGTAGAACATG--CGGCACGGCATCATCTCGCC 448836 ||||||| | ||| || ||| || | || ||| | || | || | | |||||| Sbjct 49691 GCTTGAGCTTTTGGTAGTAGATCGGGCCAAAGTACACGTACGCCTCG--AGCGACTCGCC 49634 Query 448837 CGTCTGGCCGTCCGTAAAGATCGTCTTGCCCTCGGGCTCGATCATGCCCCTCTCCTCCAT 448896 || |||| ||| | ||| ||||||| || | | | || |||| | | Sbjct 49633 GGTGATGCCGCTCGTGAGCATCTCCTTGCCCGCGTACGAGTAC---CCATTCTCGACGAG 49577 Query 448897 GTAGTCC---ATGAGCTCGGCCACGGAGAGGTCCGAAAAGGCCGTGCCGTCCTGCGGCAA 448953 | | | ||| |||| || ||| | | |||||| ||||||| |||| || Sbjct 49576 GATGCGCGACATGTCCTCGACCTTTGAGCCGCC---AAAGGCGGTGCCGTACTGCAGCTC 49520 Query 448954 GCCGC---TCTCACAGCCCGTGATGGCCTGGAGGGCCTCGAGCAACATGGCGTAGGTCAT 449010 |||| || | | | || || ||| | || ||| | || | || || |||||| Sbjct 49519 GCCGGCGATCACGCCGGCCTTGCCGGCAAGCAG---CTCAATCATCTTGCCGACGGTCAT 49463 Query 449011 GCGCGACGGGTAGGCATGCGGGTTCATGATGATGTCGGGCGTCTCGCCGGCCGCGTTGAA 449070 |||||||||| | | || |||||||||||||||||||| ||| ||||||| Sbjct 49462 GCGCGACGGGAATCCGTGGGGGTTCATGATGATGTCGGGGCAGATGCCCTTGTCGTTGAA 49403 Query 449071 GGGCATGTCCTCGGGGTTGACCACCAGGCCGTTGACGCCCTTCTGGCCGTGGCGGCTGCA 449130 ||||||||| | | || | ||||||| ||||| || ||||||||||| | Sbjct 49402 CGGCATGTCCGCCTGCGGCACGATCAGGCCGCACACGCCTTTTTGGCCGTGGCGCGACGA 49343 Query 449131 GAACTTGTCCCCCTGCTCGGG 449151 |||||||| || ||||||| Sbjct 49342 AAACTTGTCGCCGAGCTCGGG 49322 >seq56 Length=375030 Score = 87.8 bits (96), Expect = 7e-12 Identities = 87/113 (77%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 349073 GCGTCGAGAATCTCCTTGAGTCTGGGCATGCCCAGGGTCACGTTCTTGGCCGCGACGCCG 349132 |||| || ||||||||||| | |||| || ||||| |||||| | | ||||| ||| Sbjct 316857 GCGTTGATAATCTCCTTGATGCGCGGCACACCAAGGGTGACGTTCATTGATGCGACACCG 316798 Query 349133 GCAAAGTGGAAGGTCTGGAGGGTCAACTGCGTGAGGGGCTCGCCGATGCACTG 349185 ||||||||||| |||| ||| |||| ||| ||| ||||| ||||| |||| Sbjct 316797 GCAAAGTGGAACGTCTTGAGTGTCATCTGTGTGCCTGGCTCACCGATCGACTG 316745 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084737120472648