Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001264875.1_202015-08-11] 3,262 sequences; 13,707,196 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq2443 147 9e-30 seq1928 143 1e-28 seq2018 113 2e-19 seq2663 100 1e-15 >seq2443 Length=40813 Score = 147 bits (162), Expect = 9e-30 Identities = 310/453 (68%), Gaps = 17/453 (4%) Strand=Plus/Plus Query 448706 CCCTCGGTGGGCTGCCGCGTGAGGAGCGAGTACGGTCCCCTCTGCCGCGTG--TGCATCT 448763 |||||||| ||||| |||||||| | || | ||| |||| | |||||| ||||||| Sbjct 1 CCCTCGGTCGGCTGGCGCGTGAGCACCGCGCGCGGCCCCCG--GGCGCGTGCGTGCATCT 58 Query 448764 TCTCCGAGGCCAGTTGCTTGAGGCTCTGGAAGAAGAAGGGCGCGTAGAACATGCGGCACG 448823 | ||| | ||| |||||||| ||||| || ||| || || || ||| | | | Sbjct 59 TGTCCATGACCATGTGCTTGAGCTTCTGGTAGTAGATCGGGCCGAAGTACACGTAGGCCT 118 Query 448824 GCATCATCTCGCCCGTCTGGCCGTCCGTAAAGATCGTCTTGCCCTCGGGCTCGATCATGC 448883 |||| |||||| || |||| ||| | | | ||||||| || | | | || Sbjct 119 CCATCGGCTCGCCGGTGGTGCCGCTCGTGAGGTACTCCTTGCCCGCG---TAGTTGTAGC 175 Query 448884 CCCTCTCCTCCATGTAGT---CCATGAGCTCGGCCACGGAGAGGTCCGAAAAGGCCGTGC 448940 | | | | | | | ||||| |||| || |||| | | ||| ||||||| Sbjct 176 CGTTGGCGACGAGGATGCGTGCCATGTCCTCGACCTTGGAGCCGCC---AAACGCCGTGC 232 Query 448941 CGTCCTGCGGCAAGCCG-CTCTCACAGCCCGTGATGGCCTGGAGGGCCTCGAGCAACATG 448999 ||| |||| || ||||| | | || ||||| || | ||| ||||| || | || Sbjct 233 CGTACTGCAGCGAGCCGTCGATGAC-GCCCGCCTTGCCGGCGAGCAGCTCGATCATCTTG 291 Query 449000 GCGTAGGTCATGCGCGACGGGTAGGCATGCGGGTTCATGATGATGT-CGGGCGTCTCGCC 449058 || |||||||||||||||| || | ||||||||||||||||||| ||||| | ||| Sbjct 292 CCGACGGTCATGCGCGACGGGAAGCCGTGCGGGTTCATGATGATGTCCGGGCAGAT-GCC 350 Query 449059 GGCCGCGTTGAAGGGCATGTCCTCGGGGTTGACCACCAGGCCGTTGACGCCCTTCTGGCC 449118 || |||| ||||||||||| | | || | ||| ||| |||||||||||||| Sbjct 351 CTGGTCGGTGAACGGCATGTCCTCCTGCTGCACGATCAGCCCGCACACGCCCTTCTGGCC 410 Query 449119 GTGGCGGCTGCAGAACTTGTCCCCCTGCTCGGG 449151 |||||| | |||||||||| ||| |||| || Sbjct 411 GTGGCGCGAGGAGAACTTGTCGCCCAGCTCCGG 443 >seq1928 Length=92015 Score = 143 bits (158), Expect = 1e-28 Identities = 335/498 (67%), Gaps = 13/498 (3%) Strand=Plus/Minus Query 448659 AGACGCGCTCCATGTCGCCCAATCGGAGCCCGCCGTGTCGCAACTTGCCCTCGGTGGGCT 448718 || |||||||||| ||||| | || || || |||| ||| | |||||||| |||| Sbjct 75280 AGTCGCGCTCCATCTCGCCGAGACGCAGGCCACCGTCGCGCGAGCGCCCCTCGGTCGGCT 75221 Query 448719 GCCGCGTGAGGAGCGAGTACGGTCCCCTCTGCCGCGTGTGCATCTTCTCCGAGGCCAGTT 448778 | |||||||| | || | ||| |||| | || | ||||||||| ||| | ||| | Sbjct 75220 GGCGCGTGAGCACCGCGCGCGGCCCCCGCGCGCGGGCGTGCATCTTGTCCATGACCATGT 75161 Query 448779 GCTTGAGGCTCTGGAAGAAGAAGGGCGCGTAGAACATGCGGCACGGCATCATCTCGCCCG 448838 ||||||| ||||| || | | || || || ||| | | | |||| |||||| | Sbjct 75160 GCTTGAGTTTCTGGTAGTAAATCGGGCCGAAGTACACGTAGGCCTCCATCGGCTCGCCGG 75101 Query 448839 TCTGGCCGTCCGTAAAGATCGTCTTGCCCTCGGGCTCGATCATGCCCCTCTCCTCCATGT 448898 | |||| |||| | | |||||| || | | | ||| | | | | | Sbjct 75100 TGGTGCCGCTGGTAAGGTACTCCTTGCCTGCG---TAGTTGTAGCCGTTGGCGACAAGGA 75044 Query 448899 AGT---CCATGAGCTCGGCCACGGAGAGGTCCGAAAAGGCCGTGCCGTCCTGCGGCAAGC 448955 | ||||| |||| || |||| | | ||| |||||||||| |||| || ||| Sbjct 75043 TGCGTGCCATGTCCTCGACCTTGGAGCCGCC---AAACGCCGTGCCGTACTGCAGCGAGC 74987 Query 448956 CG-CTCTCACAGCCCGTGATGGCCTGGAGGGCCTCGAGCAACATGGCGTAGGTCATGCGC 449014 || | | || ||||| || | ||| ||||| || | | | |||||||||| Sbjct 74986 CGTCGATGAC-GCCCGCCTTGCCGGCGAGCAGCTCGATCATCTTACCAACGGTCATGCGC 74928 Query 449015 GACGGGTAGGCATGCGGGTTCATGATGATGTC-GGGCGTCTCGCCGGCCGCGTTGAAGGG 449073 |||||| || | |||||||||||||||||||| |||| | || | || |||| || Sbjct 74927 GACGGGAAGCCGTGCGGGTTCATGATGATGTCCGGGCAGATGCCCTGGT-CGGTGAACGG 74869 Query 449074 CATGTCCTCGGGGTTGACCACCAGGCCGTTGACGCCCTTCTGGCCGTGGCGGCTGCAGAA 449133 ||||||||| | | || | ||| || |||||||| ||||||||||| | |||| Sbjct 74868 CATGTCCTCCTGCTGCACGATCAGCCCACACACGCCCTTTTGGCCGTGGCGCGAGGAGAA 74809 Query 449134 CTTGTCCCCCTGCTCGGG 449151 |||||| ||| ||||||| Sbjct 74808 CTTGTCGCCCAGCTCGGG 74791 >seq2018 Length=17359 Score = 113 bits (124), Expect = 2e-19 Identities = 106/135 (79%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 349082 ATCTCCTTGAGTCTGGGCATGCCCAGGGTCACGTTCTTGGCCGCGACGCCGGCAAAGTGG 349141 ||||||||||| | |||| || || || |||||||||| || ||| || || ||||| Sbjct 3667 ATCTCCTTGAGGCGCGGCACACCGAGCGTGACGTTCTTGGACGAGACACCCGCGTAGTGG 3608 Query 349142 AAGGTCTGGAGGGTCAACTGCGTGAGGGGCTCGCCGATGCACTGGCCCGCGAGGATGCCT 349201 ||||| | ||| |||| |||||| |||||||||||||| ||| ||||||| |||| Sbjct 3607 AAGGTGTTGAGCGTCATCTGCGTCGCGGGCTCGCCGATGCTCTGCGCCGCGAGCGTGCCG 3548 Query 349202 ACCATCTCGCCGGGC 349216 ||||||||||||| Sbjct 3547 CACATCTCGCCGGGC 3533 >seq2663 Length=8269 Score = 100 bits (110), Expect = 1e-15 Identities = 136/184 (74%), Gaps = 13/184 (7%) Strand=Plus/Plus Query 349045 CGCAT--TGGGCTTCTTCAT---CTTGGGCGTGG-CGTCGAGAATCTCCTTGAGTCTGGG 349098 ||||| ||||| |||| || ||| | || || | || | |||||| || | ||| Sbjct 392 CGCATGATGGGCGTCTTGATGTCCTTCGACGCGGTCATC-ACAATCTCACGCAGGCGGGG 450 Query 349099 CATGCCCAGGGTCACGTTCTTGGCCGCGACG---CCGGCAAAGTGGAAGGTCTGGAGGGT 349155 ||||| || || |||||| |||||| || ||||||||||||||||| | ||| || Sbjct 451 AATGCCGAGCGTGACGTTC---GCCGCGCCGTGGCCGGCAAAGTGGAAGGTGTTGAGCGT 507 Query 349156 CAACTGCGTGAGGGGCTCGCCGATGCACTGGCCCGCGAGGATGCCTACCATCTCGCCGGG 349215 || ||||||| ||||||||||||| ||| | ||||| | ||| || |||||||||| Sbjct 508 CATCTGCGTGGACGGCTCGCCGATGCCCTGCGCGGCGAGCAGGCCGACGTTCTCGCCGGG 567 Query 349216 CGCG 349219 | || Sbjct 568 CTCG 571 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084649944497076