Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20globosa_20[genbank_20GCA_5F001264815.1_202015-08-11] 138 sequences; 8,938,591 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq74 544 3e-152 seq2 244 4e-62 >seq74 Length=3226 Score = 544 bits (602), Expect = 3e-152 Identities = 531/679 (78%), Gaps = 44/679 (6%) Strand=Plus/Plus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||||||||||||||| |||||||| ||||||| |||| | | | ||||||||||||| Sbjct 304 GAGTCGAGTTGTTTGGGATTGCAGCTCAAAATGGGTGGTAGACTCCATCTAAAGCTAAAT 363 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 || || |||||||||||||| ||||||| |||| ||||||||||||||||||||||| Sbjct 364 ATCGGGGAGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGATGAAAAGCACTTTGGAA 423 Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTTGCCCG 219 |||||||||||| | |||||||||||| ||||||||||| |||| | ||| | ||| | Sbjct 424 AGAGAGTTAAAA-GTACGTGAAATTGTCGAAAGGGAAGCACTTGAAGTCAGCCATGCT-G 481 Query 220 CAGTTG---CTCAACCGGCCCCTCGGCC--GGTGCACTCTTCTGCGGTCAGGCCAGCATC 274 | ||| |||| || | || | || | |||| | | || | || || |||||||| Sbjct 482 C--TTGAGACTCAGCCTGGCCTTTGGGCTTGGTGTATTTCTCGGTGG-CAAGCCAGCATT 538 Query 275 AGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTGTTATAGCC 334 | | ||| |||||| || || |||||||| || || | || ||||||||||| Sbjct 539 GGTTTGGGTCGTCGGAGAAGCGCATAGGGAATGTAGCGTCC--CCGGACGTGTTATAGCC 596 Query 335 -------------------CGGGGT---GGAATGCGGCCCGCC---TGGACTGAGGTCCG 369 | || | |||| || | ||| ||| | | | || Sbjct 597 TTATGCAGGATACGACGACCTGGATCAAGGAACGCAGTGTGCCCTCTGGGCGGGTCTTCG 656 Query 370 CGCTCCGGC-----TAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGG 424 | || | ||||||||||||||||||| | |||| ||||||||||| ||||||| Sbjct 657 GACACCTTCACACTTAGGATGCTGGCGTAATGGCTTTAAGTGGCCCGTCTTGAAACACGG 716 Query 425 ACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAG 484 ||||||||||||||||| | ||||||| |||||||| ||||||| || |||||||||||| Sbjct 717 ACCAAGGAGTCTAACATGTGTGCGAGTTTTTGGGTGGCAAACCCATGAGCGTAATGAAAG 776 Query 485 TGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGG 544 |||| |||||||| || | || ||||||||||||| ||||| | | |||||| Sbjct 777 TGAATACAGGTGGGATCCGC--AAGGAGCACCATCGACCGGCCCTGAACTTCTGGGATGG 834 Query 545 ATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGT 604 | |||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 835 GTCTGAGTAAGAGCATATATGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGC 894 Query 605 GAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCA 664 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 895 GAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCA 954 Query 665 AATTTGGGTATAGGGGCGA 683 ||||||||||||||||||| Sbjct 955 AATTTGGGTATAGGGGCGA 973 >seq2 Length=254 Score = 244 bits (270), Expect = 4e-62 Identities = 161/178 (90%), Gaps = 0/178 (0%) Strand=Plus/Minus Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82 ||| ||| ||||||| |||||||||||||||||||||||||||||| |||| ||||||| Sbjct 229 TGTAAAGTGCCTTCGAAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAAT 170 Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142 | | ||||||||||||||||||| |||||||||||||| ||||||| |||||| |||||| Sbjct 169 TCCATCTAAAGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGA 110 Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGC 200 ||||||| |||||| ||||||||| |||||| ||||||||||||||||||||||| || Sbjct 109 TGAAAAGAACTTTGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGC 52 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079997039900