Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Malassezia_20japonica_20[genbank_20GCA_5F001600795.1_202016-03-01]
16 sequences; 8,364,631 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq12 306 7e-81
>seq12
Length=7949
Score = 306 bits (338), Expect = 7e-81
Identities = 258/312 (83%), Gaps = 8/312 (3%)
Strand=Plus/Minus
Query 7 GTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGAGC 66
||||||| ||||||||||| ||| |||| || | | | || | | || | ||| |
Sbjct 5603 GTCCGGCTGGGCCTTTCCTCTTGGTGATC----TGTCGTACT-TGTGCG-GCAGTGGAAC 5550
Query 67 CAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTT-GCTCGAATACATT 125
|||||| ||||||||||| ||||||||||||||||||||||| || |||||| |||
Sbjct 5549 CAGGACCTTTACTTTGAAGAAATTAGAGTGTTCAAAGCAGGCTAGACGCCCGAATATATT 5490
Query 126 AGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTA 185
|||||||||||||| |||||||||||||| |||||||||||||||| | | | |||||||
Sbjct 5489 AGCATGGAATAATAAAATAGGACGTGCGGYTCTATTTTGTTGGTTTTTGGAATCGCCGTA 5430
Query 186 ATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGA 245
|||||||||||||| |||||||| | |||| ||| || ||||||||||||||||||
Sbjct 5429 ATGATTAATAGGGACGGTCGGGGGCATTAGTACTCACATGCTAGAGGTGAAATTCTTGGA 5370
Query 246 TTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAA 305
||| |||||||||||| |||||||||| || ||||||| |||||||||||||| |||
Sbjct 5369 TTTTGTGAAGACTAACTTCTGCGAAAGCATTTGCCAAGGACGTTTTCATTAATCA-AGAA 5311
Query 306 CGAAAGTTAGGG 317
|||| |||||||
Sbjct 5310 CGAAGGTTAGGG 5299
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 915199853568
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |