Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Malassezia_20japonica_20[genbank_20GCA_5F001600795.1_202016-03-01]
16 sequences; 8,364,631 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq12 551 2e-154
>seq12
Length=7949
Score = 551 bits (610), Expect = 2e-154
Identities = 532/677 (79%), Gaps = 42/677 (6%)
Strand=Plus/Minus
Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99
|||||||||||||||||| |||||||| ||||||| |||| | | | |||||||||||||
Sbjct 3510 GAGTCGAGTTGTTTGGGATTGCAGCTCAAAATGGGTGGTAGACTCCATCTAAAGCTAAAT 3451
Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159
|| || |||||||||||||| ||||||| |||| |||||||||||||||||||||||
Sbjct 3450 ATCGGGGAGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGATGAAAAGCACTTTGGAA 3391
Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTTGCC-C 218
|||||||||||| | |||||||||||| |||||||||||||||| | ||| | |||| |
Sbjct 3390 AGAGAGTTAAAA-GTACGTGAAATTGTCGAAAGGGAAGCGCTTGAAGTCAGCCATGCCGC 3332
Query 219 GCAGTTGCTCAACCGGCCCCTCGGCCGGTGCACTCTTCTGCGGT--CAGGCCAGCATCAG 276
||| |||| || | | | | |||| ||| | ||| ||| || | |||||| |
Sbjct 3331 TCAGGA-CTCAGCCTGGCTTTTGCTTGGTGTACT-TCCTG-GGTAGCAAGTCAGCATTGG 3275
Query 277 CTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTGTTATAGCCCG 336
| || | |||||| || | |||||||| | |||| ||| ||||||||||| |
Sbjct 3274 TTTGGACCGTCGGAGAAGCATGGCAGGAATGTGACGCCCTC--GGGCGTGTTATAGCCTG 3217
Query 337 GGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGC-----GC--TCCGGC----------- 378
| | || || || | || ||| ||| ||| || | ||||
Sbjct 3216 CCATTGGATACG-CCGGTCTAGACCAAGGAACGCAGTGCGCCTTACGGCGGGTCTTCGGA 3158
Query 379 ------------TAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGAC 426
||||||||||||||||||| | |||||||||||||||| |||||||||
Sbjct 3157 CACCTTCGCACTTAGGATGCTGGCGTAATGGCTTTAAGCGGCCCGTCTTGAAACACGGAC 3098
Query 427 CAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTG 486
||||||||||||||| | ||||||| |||||||| ||||||| || ||||||||||||||
Sbjct 3097 CAAGGAGTCTAACATATGTGCGAGTTTTTGGGTGGCAAACCCATGAGCGTAATGAAAGTG 3038
Query 487 AACGGAGGTGGGAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGAT 546
|| | |||||||| || | || ||||||||||||| | |||| | | |||| | |
Sbjct 3037 AATGCAGGTGGGATCCGC--AAGGAGCACCATCGACCGGCCGTGATCTTCTGGGATCGGT 2980
Query 547 TTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGA 606
||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||
Sbjct 2979 CTGAGTAAGAGCATGTATGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGCGA 2920
Query 607 AGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAA 666
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||
Sbjct 2919 AGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCGAA 2860
Query 667 TTTGGGTATAGGGGCGA 683
|||||||||||||||||
Sbjct 2859 TTTGGGTATAGGGGCGA 2843
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079999656800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |